| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is thyA [H]
Identifier: 157368568
GI number: 157368568
Start: 371991
End: 372968
Strand: Reverse
Name: thyA [H]
Synonym: Spro_0319
Alternate gene names: 157368568
Gene position: 372968-371991 (Counterclockwise)
Preceding gene: 157368577
Following gene: 157368567
Centisome position: 6.84
GC content: 46.42
Gene sequence:
>978_bases ATGACTCTTCTGGTGACAGCTGAATGTGTTGACGATCTGTTAAACGATGTCCATCAGGCGATCCTGACTGACGGACTCTG GAATACTCCCACTAAAGGAGCAAATATTGAGATTCTGGGAGCCTACCTGATTCTCACCGATCCTCGCCGCAGAATAAGCA GGACAGAATCCCGCGGTAAAATTATCAGCTGTCTGGGGGAATTGCTGTGGTACCTCTCAGCCCAGAACGATCTCGATTTC ATCCGGCACTTCATACCTCGCTACGTAAAATACGCTGAATCCGATGGCAGAATACACGGGGGATATGGTCCGAGATTATT TAGTATGCACGGGCTGTATAATCAGCTGGAAAATGTCATCAGTCTGCTGCAGGAGAAAAGAACTACTCGACGCGCACTGA TACAACTGTTTGATGCCTCAGATCTGGTTACGGATAATCCAGAACAAACAGAATATGCCGATATTCCGTGCACGATATCG TTGCAATTTATTGTCAGACAAGACGCACTGCATCTTTTTGTCTGTATGCGCTCTAACGATGCCTTTATGGGCTTACCCCA TGATGTGTTCGCCTTCACGATGTTGCAGGAACTGGTCGCCCGCCTCACCGGGTGCAAACTGGGTCATTATCATCACTTCG TCTCAAGCCTCCATATCTATGAAGAACATTTTGAACAAGTAAAAGCGCTACAGCAAGAAGGCTTTATGAGTACCTTGCCG GTGATGGGTGATATGCCTGAAATTCAATCCTTAAAGGACATTACAGTCATCCTTGAAGCAGAAAAGGCTCTGCGGGAAAA CAAGGAATTTGATATCGATACTATGCCCCTGAGTGACTACTGGAAGGATATGCTGCGCGTGATAAAGACCCATTTTTTGT TGCGTTCACATACGTCGGCACACGATGAGCTGGCCCGCCAGGAGCTGACTGCACTGAATAATCAGGAATACCGATTTATT TTTGACGGGAAAATATAA
Upstream 100 bases:
>100_bases GTGTCATAGCTGCTATAGCCCTGTTTGTACTAATGTCATATTGACTCTTTATCGTACGGGTGGTAATGATTTGTTACATT CATAATATAACAGGCAGTAT
Downstream 100 bases:
>100_bases TGAACAGACACAGTCAGGCCAGCCAGCTGGTCGCAGCTCTTCAAAACTTCAGTCGCGATGAACATCCCCTGAACGGACTG AGTTCTCCGGCTCACTATAA
Product: thymidylate synthase
Products: NA
Alternate protein names: TS; TSase [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTLLVTAECVDDLLNDVHQAILTDGLWNTPTKGANIEILGAYLILTDPRRRISRTESRGKIISCLGELLWYLSAQNDLDF IRHFIPRYVKYAESDGRIHGGYGPRLFSMHGLYNQLENVISLLQEKRTTRRALIQLFDASDLVTDNPEQTEYADIPCTIS LQFIVRQDALHLFVCMRSNDAFMGLPHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMSTLP VMGDMPEIQSLKDITVILEAEKALRENKEFDIDTMPLSDYWKDMLRVIKTHFLLRSHTSAHDELARQELTALNNQEYRFI FDGKI
Sequences:
>Translated_325_residues MTLLVTAECVDDLLNDVHQAILTDGLWNTPTKGANIEILGAYLILTDPRRRISRTESRGKIISCLGELLWYLSAQNDLDF IRHFIPRYVKYAESDGRIHGGYGPRLFSMHGLYNQLENVISLLQEKRTTRRALIQLFDASDLVTDNPEQTEYADIPCTIS LQFIVRQDALHLFVCMRSNDAFMGLPHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMSTLP VMGDMPEIQSLKDITVILEAEKALRENKEFDIDTMPLSDYWKDMLRVIKTHFLLRSHTSAHDELARQELTALNNQEYRFI FDGKI >Mature_324_residues TLLVTAECVDDLLNDVHQAILTDGLWNTPTKGANIEILGAYLILTDPRRRISRTESRGKIISCLGELLWYLSAQNDLDFI RHFIPRYVKYAESDGRIHGGYGPRLFSMHGLYNQLENVISLLQEKRTTRRALIQLFDASDLVTDNPEQTEYADIPCTISL QFIVRQDALHLFVCMRSNDAFMGLPHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMSTLPV MGDMPEIQSLKDITVILEAEKALRENKEFDIDTMPLSDYWKDMLRVIKTHFLLRSHTSAHDELARQELTALNNQEYRFIF DGKI
Specific function: Provides the sole de novo source of dTMP for DNA biosynthesis [H]
COG id: COG0207
COG function: function code F; Thymidylate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thymidylate synthase family. Bacterial- type thyA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 391 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000398 - InterPro: IPR020940 [H]
Pfam domain/function: PF00303 Thymidylat_synt [H]
EC number: =2.1.1.45 [H]
Molecular weight: Translated: 37494; Mature: 37362
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLVTAECVDDLLNDVHQAILTDGLWNTPTKGANIEILGAYLILTDPRRRISRTESRGK CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCH IISCLGELLWYLSAQNDLDFIRHFIPRYVKYAESDGRIHGGYGPRLFSMHGLYNQLENVI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH SLLQEKRTTRRALIQLFDASDLVTDNPEQTEYADIPCTISLQFIVRQDALHLFVCMRSND HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCEEEEEEEECCC AFMGLPHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMSTLP CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC VMGDMPEIQSLKDITVILEAEKALRENKEFDIDTMPLSDYWKDMLRVIKTHFLLRSHTSA CCCCCHHHHHHHHHHHHEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH HDELARQELTALNNQEYRFIFDGKI HHHHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure TLLVTAECVDDLLNDVHQAILTDGLWNTPTKGANIEILGAYLILTDPRRRISRTESRGK EEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCH IISCLGELLWYLSAQNDLDFIRHFIPRYVKYAESDGRIHGGYGPRLFSMHGLYNQLENVI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH SLLQEKRTTRRALIQLFDASDLVTDNPEQTEYADIPCTISLQFIVRQDALHLFVCMRSND HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCEEEEEEEECCC AFMGLPHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMSTLP CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC VMGDMPEIQSLKDITVILEAEKALRENKEFDIDTMPLSDYWKDMLRVIKTHFLLRSHTSA CCCCCHHHHHHHHHHHHEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH HDELARQELTALNNQEYRFIFDGKI HHHHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA