| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368474
Identifier: 157368474
GI number: 157368474
Start: 253017
End: 255074
Strand: Reverse
Name: 157368474
Synonym: Spro_0225
Alternate gene names: NA
Gene position: 255074-253017 (Counterclockwise)
Preceding gene: 157368475
Following gene: 157368469
Centisome position: 4.68
GC content: 59.18
Gene sequence:
>2058_bases TTGTCACACCTTAATGCTCGCACTCTTCCACTGGCAGCCCTGATCGGCTCAGCGTTGGCGCTGCCGATTAACGGCTACGC CTGCGGACCGGATTTCCCTAACCGGTTGCTGGTCGATCGTAACGGCACACTGCTGTATATGCCGGAAGGCAATTTTGCCT TTGAAGCCGGCCGCCTGGTCGCGATAGATAAGCAACTACCGCAATGGAAAGCGCCACCGCCGCCCATGCCGCCGAAACCG ATGCCCCTGTCGCCAGAAACCATCATCATCGGCAAAATGCGCGCGGCAAAAACCGTTGAAGAGGCCGATGCGGTCAATAC TCAGGGGTTGTCTGATGCCGCTCGCCTGTACCAACTGGGCGCAGTGGCCTTTGCCGGCCAGGATCCGCGGGCCGGCGAAT ACTTCCAGCAGGTATTGGCGCTACCCGCTGCAGAACAGGGCGATTGGGGGCTACGAGCGCAATACTCACTCGGCCGACTG CTGATGGGCGATCACGGCACGCCAGAGAACGAAAGTGGCGAACCGGCTGCGACGGCCAAACACCCGGCAAAACCGCAGCT GGAGCAAGCGCTGGCGGCTTTCCAGCAGGTGATTGAGCGAGTGAAAAGCGGCACGGCCGATCCGGATCAACTGGCGCTGA GCAGTCTCGGCCAGCAGGCACGTATCCACCTGTGGCTCAATGACGTGACTCAAGCGGCGCGGCTGTATGCCCAGCAGGCG GCTCAGGGCGATCAAAACGGCGGACTGTCGTTGCAGTACGTTTCCAGCTATCTGGTCAATCCTGACCACTTCGATACGCT AAAACAGGCGATTACCGATCCGCTGATCCAGCAATTGGTCACTATCGAACTGTTCGCCCGCAGCAGTAATCTGCAAATGG CCGACACGGACGGCACCGGTAGCCGCTCAACGCAGATTATCAGCCAAATTCTGACGCTGTTGGACGCCTCGGTGAAAAAC GGCTTCAGCGGCAGCGACCGGTTGGCAGCATTGGCCTACCGCACCGGGCAATATCCGATGGCGGCCAGCCTGCTGAAACA CGCCGGTGACAGTGGCCTGGCCTGGTGGCTACGCGCCAAGATGGCGCTGCGTGACGGTGATGTGAAAGCCGCTACCGCAA ACTACGCCAAAGCGGCGGCTGCTTTCCCATCCAGTGAAAGCTGGGGCGAGCAGCGCAATGCCGACTTTGTGCAAGAAACC ATTGTGCCCGAGTGTCGGGTGGCGGGTGAGCAGGCGATCCTGGCACTCGATCGCGGTGACTATCTACAGGCAATGGATTT CCTGTATCGCGGTAAAGAGATTTATTGGGCTGACGTCGCCGACGTAGCCGAACGGGTGTTGACCGTCGACGAGCTGAAAG GCTTTGTCGATAAACATGCGCCAGCACCAACTACGCCGCTAAAACCGGTCAATCCGGACGAGTACAGCGGCCAGCCACTG ACGCCAGAGGTACAACTGCGCGAGCTGCTGGCGCGACGGCTGATGCGTGCCGGACGTCCTCAAGAGGCCATGGGCTATTT CGACATCCCTAACTATCGTCAGGTGGCACAACAGTACGCCGATACGCTGAAAACGGCGCAGGACAAAACCGCCGATAAAC TGGCGCGCGCCAAAGCCTATTATCAGGCGGCCACGCTACTGCGCACACAAGGGCTAACCTTCACCGGCTATGAGATGACG CCGGATTACGCGATTTATGACGCAGGTTATTCCTATCTGGGAGATGCGTTTGATACTCGCGAACTCAAACATAAGAGTTG GATCAGCAGCGCGGAAGCGGCACGGGCCAAAGCGGCACTGCCGCCACAGGACAATCGCTTCCTGCACTATCGTTGGCAGG CCGTCACTCTGGCCCAGCAGGCTGCCGATTTGCTGCCACCAAAAAGCCAGGCCTATGCCGCCGTGCTGTGCAATGCCGCC GGTTGGGTGATAAAACGTGATGCAAAAACCGGTCAGGCACTGTATCAGCGCTATATCAACACCGGGTCTCGTTATCCCTG GGCCAACAAGTTTGGCTATAGCTGCCCGGCGCCAGACTTCGCTGCCGTTACGCCATAG
Upstream 100 bases:
>100_bases CGGCAACGCTTTGTCCTGATTAGCGGCGACCAGTTACGTGCCGGGCAATCCCGGCCACTGGGCTGGCTGCGCTGCCAACA ACTGACGCCAGGAGGCACCC
Downstream 100 bases:
>100_bases CGCCGAATTTCAGGCACAAAAAAGCCCGGCTAGCCGGGCTTTTTAACGCTTACGCGGGATTAGGCTTCGATCGCCATTTT CAGTTTCTTCATGGCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Domain-Containing Protein
Number of amino acids: Translated: 685; Mature: 684
Protein sequence:
>685_residues MSHLNARTLPLAALIGSALALPINGYACGPDFPNRLLVDRNGTLLYMPEGNFAFEAGRLVAIDKQLPQWKAPPPPMPPKP MPLSPETIIIGKMRAAKTVEEADAVNTQGLSDAARLYQLGAVAFAGQDPRAGEYFQQVLALPAAEQGDWGLRAQYSLGRL LMGDHGTPENESGEPAATAKHPAKPQLEQALAAFQQVIERVKSGTADPDQLALSSLGQQARIHLWLNDVTQAARLYAQQA AQGDQNGGLSLQYVSSYLVNPDHFDTLKQAITDPLIQQLVTIELFARSSNLQMADTDGTGSRSTQIISQILTLLDASVKN GFSGSDRLAALAYRTGQYPMAASLLKHAGDSGLAWWLRAKMALRDGDVKAATANYAKAAAAFPSSESWGEQRNADFVQET IVPECRVAGEQAILALDRGDYLQAMDFLYRGKEIYWADVADVAERVLTVDELKGFVDKHAPAPTTPLKPVNPDEYSGQPL TPEVQLRELLARRLMRAGRPQEAMGYFDIPNYRQVAQQYADTLKTAQDKTADKLARAKAYYQAATLLRTQGLTFTGYEMT PDYAIYDAGYSYLGDAFDTRELKHKSWISSAEAARAKAALPPQDNRFLHYRWQAVTLAQQAADLLPPKSQAYAAVLCNAA GWVIKRDAKTGQALYQRYINTGSRYPWANKFGYSCPAPDFAAVTP
Sequences:
>Translated_685_residues MSHLNARTLPLAALIGSALALPINGYACGPDFPNRLLVDRNGTLLYMPEGNFAFEAGRLVAIDKQLPQWKAPPPPMPPKP MPLSPETIIIGKMRAAKTVEEADAVNTQGLSDAARLYQLGAVAFAGQDPRAGEYFQQVLALPAAEQGDWGLRAQYSLGRL LMGDHGTPENESGEPAATAKHPAKPQLEQALAAFQQVIERVKSGTADPDQLALSSLGQQARIHLWLNDVTQAARLYAQQA AQGDQNGGLSLQYVSSYLVNPDHFDTLKQAITDPLIQQLVTIELFARSSNLQMADTDGTGSRSTQIISQILTLLDASVKN GFSGSDRLAALAYRTGQYPMAASLLKHAGDSGLAWWLRAKMALRDGDVKAATANYAKAAAAFPSSESWGEQRNADFVQET IVPECRVAGEQAILALDRGDYLQAMDFLYRGKEIYWADVADVAERVLTVDELKGFVDKHAPAPTTPLKPVNPDEYSGQPL TPEVQLRELLARRLMRAGRPQEAMGYFDIPNYRQVAQQYADTLKTAQDKTADKLARAKAYYQAATLLRTQGLTFTGYEMT PDYAIYDAGYSYLGDAFDTRELKHKSWISSAEAARAKAALPPQDNRFLHYRWQAVTLAQQAADLLPPKSQAYAAVLCNAA GWVIKRDAKTGQALYQRYINTGSRYPWANKFGYSCPAPDFAAVTP >Mature_684_residues SHLNARTLPLAALIGSALALPINGYACGPDFPNRLLVDRNGTLLYMPEGNFAFEAGRLVAIDKQLPQWKAPPPPMPPKPM PLSPETIIIGKMRAAKTVEEADAVNTQGLSDAARLYQLGAVAFAGQDPRAGEYFQQVLALPAAEQGDWGLRAQYSLGRLL MGDHGTPENESGEPAATAKHPAKPQLEQALAAFQQVIERVKSGTADPDQLALSSLGQQARIHLWLNDVTQAARLYAQQAA QGDQNGGLSLQYVSSYLVNPDHFDTLKQAITDPLIQQLVTIELFARSSNLQMADTDGTGSRSTQIISQILTLLDASVKNG FSGSDRLAALAYRTGQYPMAASLLKHAGDSGLAWWLRAKMALRDGDVKAATANYAKAAAAFPSSESWGEQRNADFVQETI VPECRVAGEQAILALDRGDYLQAMDFLYRGKEIYWADVADVAERVLTVDELKGFVDKHAPAPTTPLKPVNPDEYSGQPLT PEVQLRELLARRLMRAGRPQEAMGYFDIPNYRQVAQQYADTLKTAQDKTADKLARAKAYYQAATLLRTQGLTFTGYEMTP DYAIYDAGYSYLGDAFDTRELKHKSWISSAEAARAKAALPPQDNRFLHYRWQAVTLAQQAADLLPPKSQAYAAVLCNAAG WVIKRDAKTGQALYQRYINTGSRYPWANKFGYSCPAPDFAAVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74831; Mature: 74700
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLNARTLPLAALIGSALALPINGYACGPDFPNRLLVDRNGTLLYMPEGNFAFEAGRLV CCCCCCCHHHHHHHHHHHHEECCCCEECCCCCCCCEEEECCCCEEEEECCCEEECCCCEE AIDKQLPQWKAPPPPMPPKPMPLSPETIIIGKMRAAKTVEEADAVNTQGLSDAARLYQLG EECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHH AVAFAGQDPRAGEYFQQVLALPAAEQGDWGLRAQYSLGRLLMGDHGTPENESGEPAATAK HHEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHCHHEECCCCCCCCCCCCCCCCCC HPAKPQLEQALAAFQQVIERVKSGTADPDQLALSSLGQQARIHLWLNDVTQAARLYAQQA CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHH AQGDQNGGLSLQYVSSYLVNPDHFDTLKQAITDPLIQQLVTIELFARSSNLQMADTDGTG HCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC SRSTQIISQILTLLDASVKNGFSGSDRLAALAYRTGQYPMAASLLKHAGDSGLAWWLRAK CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH MALRDGDVKAATANYAKAAAAFPSSESWGEQRNADFVQETIVPECRVAGEQAILALDRGD HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCEEEEECCCC YLQAMDFLYRGKEIYWADVADVAERVLTVDELKGFVDKHAPAPTTPLKPVNPDEYSGQPL HHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC TPEVQLRELLARRLMRAGRPQEAMGYFDIPNYRQVAQQYADTLKTAQDKTADKLARAKAY CHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQAATLLRTQGLTFTGYEMTPDYAIYDAGYSYLGDAFDTRELKHKSWISSAEAARAKAAL HHHHHHHHHCCCEEECCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC PPQDNRFLHYRWQAVTLAQQAADLLPPKSQAYAAVLCNAAGWVIKRDAKTGQALYQRYIN CCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH TGSRYPWANKFGYSCPAPDFAAVTP CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHLNARTLPLAALIGSALALPINGYACGPDFPNRLLVDRNGTLLYMPEGNFAFEAGRLV CCCCCCHHHHHHHHHHHHEECCCCEECCCCCCCCEEEECCCCEEEEECCCEEECCCCEE AIDKQLPQWKAPPPPMPPKPMPLSPETIIIGKMRAAKTVEEADAVNTQGLSDAARLYQLG EECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHH AVAFAGQDPRAGEYFQQVLALPAAEQGDWGLRAQYSLGRLLMGDHGTPENESGEPAATAK HHEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHCHHEECCCCCCCCCCCCCCCCCC HPAKPQLEQALAAFQQVIERVKSGTADPDQLALSSLGQQARIHLWLNDVTQAARLYAQQA CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHH AQGDQNGGLSLQYVSSYLVNPDHFDTLKQAITDPLIQQLVTIELFARSSNLQMADTDGTG HCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC SRSTQIISQILTLLDASVKNGFSGSDRLAALAYRTGQYPMAASLLKHAGDSGLAWWLRAK CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH MALRDGDVKAATANYAKAAAAFPSSESWGEQRNADFVQETIVPECRVAGEQAILALDRGD HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCEEEEECCCC YLQAMDFLYRGKEIYWADVADVAERVLTVDELKGFVDKHAPAPTTPLKPVNPDEYSGQPL HHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC TPEVQLRELLARRLMRAGRPQEAMGYFDIPNYRQVAQQYADTLKTAQDKTADKLARAKAY CHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQAATLLRTQGLTFTGYEMTPDYAIYDAGYSYLGDAFDTRELKHKSWISSAEAARAKAAL HHHHHHHHHCCCEEECCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC PPQDNRFLHYRWQAVTLAQQAADLLPPKSQAYAAVLCNAAGWVIKRDAKTGQALYQRYIN CCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH TGSRYPWANKFGYSCPAPDFAAVTP CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA