| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is glpB [H]
Identifier: 157368450
GI number: 157368450
Start: 226629
End: 227903
Strand: Direct
Name: glpB [H]
Synonym: Spro_0201
Alternate gene names: 157368450
Gene position: 226629-227903 (Clockwise)
Preceding gene: 157368449
Following gene: 157368451
Centisome position: 4.16
GC content: 60.39
Gene sequence:
>1275_bases ATGATGCGATTTGACGTAGTGGTGATTGGCGGTGGCCTGGCAGGCATGAGTTGTGCCATTCGATTGGCAGAGCAAGGTAA GCGCTGCGCCGTGGTCAGTTCAGGCCAGAGTGCACTCTATTTTTCATCCGGATCGCTTGATCTGCTGGCGCAGCTGCCCG ACGGCACCCTGGTGGAATCACCGTTGATGGCGCTACCGGCACTTGAGCTGCAAGCGCCACGGCATCCTTATGCGCTGATC GGCGCTGAACGGGTGGCCGCACTGTCAGATGATGCGGCTCTGCTGTTGCAACGCTGCGGCTTGAGCCTGCAAGGCAGCAA TGAGCGTAATCATCTGCGGGTGACTCCGCTGGGTACGCGCCGGGCCACCTGGCTTAGTCCTCAGGCTATTCCGGTCACGC CGTTGGACGGCGAACTGCCGTGGAAAAATATCGCGGTGATCGGCATTGAAGGATTTTTGGATTTTCAGCCACAGCTGGCC GCCAGTTCCCTGGTACAGACGCTGGGCATCAAGGCGGAAGTGGCTTATATGCACTTGCCGGCGCTGGATCGGCTGCGTAA CAACCCCAGTGAGTTCCGGGCGGTGAATATCGCCAGGGTGCTGGATCTGCCGGAAAACCTGACGCCGATGGCAGAAGAAA TGCGCCGGTTGGCCGGTGATGCCGAGGCGATTTTCCTGCCTGCCTGTCTGGGGCTGGAAGATGATAGCGCACTGGCCGCG TTGCGGGCGGCGGTGGGTAAACCGATTCTGCTGTTACCGACGTTGCCGCCTTCGGTATTGGGTATGCGCCTGCATCAGGC GCTGCGTTCGCGTCTGCAGCAACTGGGCGGCGTTTTTATGCCGGGTGACAGCGTACTGCGGGCAGATATCGAAGCCGGGC GAATCACTGGCCTCTATACCCGCAACCATACCGATATTCCATTGCTGGCGCAGCAGGTGGTGCTGGCCAGCGGCAGCTTC TTCAGCAACGGACTGGTGGCGGGCTTCGACGGCATACGTGAACCGGTGTTTGGGCTGGATGTCGACAGCCGTGCGGATCG CGCAGACTGGAGCGATCGCAATCTGTTTGCTCCGCAACCCTATTTGCAATTTGGGGTACGTACCGATAACCGACTGCGTG CCTTAAGGCAGGGGGAGCCATTGAGCAACCTGTATGCCATCGGCGCAGTGACCGGCGGCTATGATCCCCTGCAGCAGGGC TGCGGTGCGGGTGTTTCGCTGATTGGGGCGCTGTACGTCGCGCAACAGATTGCGGCACAGGAGGAGCGTCCATGA
Upstream 100 bases:
>100_bases AGACCGATCGCCTGGGGCGATGCGCTACGTGAAAGTGAGTTTACCAGTTGGGTTTATCAGGGATTGTGCGGGCTCGATGC CCGGGGGGAACAGGAGGCCG
Downstream 100 bases:
>100_bases GCCTGCATAAAGACAACAGTTTTGAGAATTGCATCAAATGTACCGTCTGTACCACCTATTGTCCGGTGGCCAAGGTGAAT CCGCTCTATCCGGGGCCAAA
Product: anaerobic glycerol-3-phosphate dehydrogenase subunit B
Products: NA
Alternate protein names: Anaerobic G-3-P dehydrogenase subunit B; Anaerobic G3Pdhase B [H]
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MMRFDVVVIGGGLAGMSCAIRLAEQGKRCAVVSSGQSALYFSSGSLDLLAQLPDGTLVESPLMALPALELQAPRHPYALI GAERVAALSDDAALLLQRCGLSLQGSNERNHLRVTPLGTRRATWLSPQAIPVTPLDGELPWKNIAVIGIEGFLDFQPQLA ASSLVQTLGIKAEVAYMHLPALDRLRNNPSEFRAVNIARVLDLPENLTPMAEEMRRLAGDAEAIFLPACLGLEDDSALAA LRAAVGKPILLLPTLPPSVLGMRLHQALRSRLQQLGGVFMPGDSVLRADIEAGRITGLYTRNHTDIPLLAQQVVLASGSF FSNGLVAGFDGIREPVFGLDVDSRADRADWSDRNLFAPQPYLQFGVRTDNRLRALRQGEPLSNLYAIGAVTGGYDPLQQG CGAGVSLIGALYVAQQIAAQEERP
Sequences:
>Translated_424_residues MMRFDVVVIGGGLAGMSCAIRLAEQGKRCAVVSSGQSALYFSSGSLDLLAQLPDGTLVESPLMALPALELQAPRHPYALI GAERVAALSDDAALLLQRCGLSLQGSNERNHLRVTPLGTRRATWLSPQAIPVTPLDGELPWKNIAVIGIEGFLDFQPQLA ASSLVQTLGIKAEVAYMHLPALDRLRNNPSEFRAVNIARVLDLPENLTPMAEEMRRLAGDAEAIFLPACLGLEDDSALAA LRAAVGKPILLLPTLPPSVLGMRLHQALRSRLQQLGGVFMPGDSVLRADIEAGRITGLYTRNHTDIPLLAQQVVLASGSF FSNGLVAGFDGIREPVFGLDVDSRADRADWSDRNLFAPQPYLQFGVRTDNRLRALRQGEPLSNLYAIGAVTGGYDPLQQG CGAGVSLIGALYVAQQIAAQEERP >Mature_424_residues MMRFDVVVIGGGLAGMSCAIRLAEQGKRCAVVSSGQSALYFSSGSLDLLAQLPDGTLVESPLMALPALELQAPRHPYALI GAERVAALSDDAALLLQRCGLSLQGSNERNHLRVTPLGTRRATWLSPQAIPVTPLDGELPWKNIAVIGIEGFLDFQPQLA ASSLVQTLGIKAEVAYMHLPALDRLRNNPSEFRAVNIARVLDLPENLTPMAEEMRRLAGDAEAIFLPACLGLEDDSALAA LRAAVGKPILLLPTLPPSVLGMRLHQALRSRLQQLGGVFMPGDSVLRADIEAGRITGLYTRNHTDIPLLAQQVVLASGSF FSNGLVAGFDGIREPVFGLDVDSRADRADWSDRNLFAPQPYLQFGVRTDNRLRALRQGEPLSNLYAIGAVTGGYDPLQQG CGAGVSLIGALYVAQQIAAQEERP
Specific function: Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor [H]
COG id: COG3075
COG function: function code E; Anaerobic glycerol-3-phosphate dehydrogenase
Gene ontology:
Cell location: Loosely Bound To The Cytoplasm Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anaerobic G-3-P dehydrogenase subunit B family [H]
Homologues:
Organism=Escherichia coli, GI1788575, Length=417, Percent_Identity=52.2781774580336, Blast_Score=392, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 - InterPro: IPR009158 [H]
Pfam domain/function: PF00890 FAD_binding_2 [H]
EC number: =1.1.5.3 [H]
Molecular weight: Translated: 45393; Mature: 45393
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRFDVVVIGGGLAGMSCAIRLAEQGKRCAVVSSGQSALYFSSGSLDLLAQLPDGTLVES CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCCC PLMALPALELQAPRHPYALIGAERVAALSDDAALLLQRCGLSLQGSNERNHLRVTPLGTR CHHHCCCHHHCCCCCCEEEECHHHHHHCCCHHHHHHHHCCCCEECCCCCCEEEEEECCCC RATWLSPQAIPVTPLDGELPWKNIAVIGIEGFLDFQPQLAASSLVQTLGIKAEVAYMHLP CCEECCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECC ALDRLRNNPSEFRAVNIARVLDLPENLTPMAEEMRRLAGDAEAIFLPACLGLEDDSALAA CHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH LRAAVGKPILLLPTLPPSVLGMRLHQALRSRLQQLGGVFMPGDSVLRADIEAGRITGLYT HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEECCCCCEEEEEE RNHTDIPLLAQQVVLASGSFFSNGLVAGFDGIREPVFGLDVDSRADRADWSDRNLFAPQP CCCCCCHHHHHHHHHHCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH YLQFGVRTDNRLRALRQGEPLSNLYAIGAVTGGYDPLQQGCGAGVSLIGALYVAQQIAAQ HHHCCCCCCHHHHHHHCCCCHHHEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH EERP CCCC >Mature Secondary Structure MMRFDVVVIGGGLAGMSCAIRLAEQGKRCAVVSSGQSALYFSSGSLDLLAQLPDGTLVES CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCCC PLMALPALELQAPRHPYALIGAERVAALSDDAALLLQRCGLSLQGSNERNHLRVTPLGTR CHHHCCCHHHCCCCCCEEEECHHHHHHCCCHHHHHHHHCCCCEECCCCCCEEEEEECCCC RATWLSPQAIPVTPLDGELPWKNIAVIGIEGFLDFQPQLAASSLVQTLGIKAEVAYMHLP CCEECCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECC ALDRLRNNPSEFRAVNIARVLDLPENLTPMAEEMRRLAGDAEAIFLPACLGLEDDSALAA CHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH LRAAVGKPILLLPTLPPSVLGMRLHQALRSRLQQLGGVFMPGDSVLRADIEAGRITGLYT HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEECCCCCEEEEEE RNHTDIPLLAQQVVLASGSFFSNGLVAGFDGIREPVFGLDVDSRADRADWSDRNLFAPQP CCCCCCHHHHHHHHHHCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH YLQFGVRTDNRLRALRQGEPLSNLYAIGAVTGGYDPLQQGCGAGVSLIGALYVAQQIAAQ HHHCCCCCCHHHHHHHCCCCHHHEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH EERP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA