| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yigL [H]
Identifier: 157368446
GI number: 157368446
Start: 221287
End: 222087
Strand: Direct
Name: yigL [H]
Synonym: Spro_0197
Alternate gene names: 157368446
Gene position: 221287-222087 (Clockwise)
Preceding gene: 157368445
Following gene: 157368449
Centisome position: 4.06
GC content: 55.31
Gene sequence:
>801_bases ATGTATCACGTCGTCGCTTCCGATTTAGATGGCACGCTGCTGTCACCCGACCACACTCTGTCCCCTTACGCCAAAGAGAC ACTGAAGCTGCTGACCCAGCGTGGCGTACATTTTGTCTTTGCTACCGGCCGTCATCATATCGACGTTGCGCAGATCCGCG ATAACCTCGAGATCAGCGCCTTTATGATCACCTCCAACGGCGCCCGCGTGCACAACACCGACGGTGAACTGATTTTCAGC CATAACCTGGCCGAAGACATTGCCCGCGATCTCTACGGCATGCTGCATAACGATCCGGACATCACCACTAACGTTTATCG TAATGACGACTGGTTCATTAACCGCGAAAGTCCGGAGCAGAAAGAGTTTTTTCAGGAGTCCGTCTTCCAGTATCAACTGT TTGAGCCGGGCCTGCTGGAAACCGATGGCGTCTGCAAGGTGTACTTCACCTGTGACGATCATGAAAAGCTGTTGCCGCTG GAAGATGCCATCAATGCGCGTTGGGGCGATCGGGTTAACGTCAGCTTCTCGTTCCCAACCTGCCTGGAAGTCATGGCGGG TGGCGTGTCGAAAGGTCACGCATTGGAAGAAGTGGCCAAGATCATCGGCTATACGCTGAAAGAGTGCATTGCCTTCGGCG ACGGTATGAATGACCTGGAAATGCTGTCGATGGCCGGCAAGGGCTGCATCATGCGCGACGCGCACCAGCGGCTGAAAGAC AAGCTGCCGGAGCTGGAAGTGATCGGCTCCAACGTCGATGACGCGGTGCCGCACTACCTGCGCAAGATGTTCCTGGGTTG A
Upstream 100 bases:
>100_bases TGCGCGCCGAAGCATTGAGCGCAATCCTGCGTTTCTTTGCTCATCACTTAGGTGGTACCCCAACCGCCGACCACACCATT AGAGGTTAGAAATTACCGCT
Downstream 100 bases:
>100_bases TATGAACGGGGCGCCTCGCGGCGCCCCAATCGGTATTACTTGTGCTGGCCCTGCTTTTGCAGGAATTGCACGCCCTTGTC AGGGAAGTCGGTGAACACGC
Product: putative sugar phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MYHVVASDLDGTLLSPDHTLSPYAKETLKLLTQRGVHFVFATGRHHIDVAQIRDNLEISAFMITSNGARVHNTDGELIFS HNLAEDIARDLYGMLHNDPDITTNVYRNDDWFINRESPEQKEFFQESVFQYQLFEPGLLETDGVCKVYFTCDDHEKLLPL EDAINARWGDRVNVSFSFPTCLEVMAGGVSKGHALEEVAKIIGYTLKECIAFGDGMNDLEMLSMAGKGCIMRDAHQRLKD KLPELEVIGSNVDDAVPHYLRKMFLG
Sequences:
>Translated_266_residues MYHVVASDLDGTLLSPDHTLSPYAKETLKLLTQRGVHFVFATGRHHIDVAQIRDNLEISAFMITSNGARVHNTDGELIFS HNLAEDIARDLYGMLHNDPDITTNVYRNDDWFINRESPEQKEFFQESVFQYQLFEPGLLETDGVCKVYFTCDDHEKLLPL EDAINARWGDRVNVSFSFPTCLEVMAGGVSKGHALEEVAKIIGYTLKECIAFGDGMNDLEMLSMAGKGCIMRDAHQRLKD KLPELEVIGSNVDDAVPHYLRKMFLG >Mature_266_residues MYHVVASDLDGTLLSPDHTLSPYAKETLKLLTQRGVHFVFATGRHHIDVAQIRDNLEISAFMITSNGARVHNTDGELIFS HNLAEDIARDLYGMLHNDPDITTNVYRNDDWFINRESPEQKEFFQESVFQYQLFEPGLLETDGVCKVYFTCDDHEKLLPL EDAINARWGDRVNVSFSFPTCLEVMAGGVSKGHALEEVAKIIGYTLKECIAFGDGMNDLEMLSMAGKGCIMRDAHQRLKD KLPELEVIGSNVDDAVPHYLRKMFLG
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI48994981, Length=265, Percent_Identity=78.1132075471698, Blast_Score=444, Evalue=1e-126, Organism=Escherichia coli, GI87081741, Length=260, Percent_Identity=38.8461538461538, Blast_Score=183, Evalue=1e-47, Organism=Escherichia coli, GI1786982, Length=272, Percent_Identity=25.7352941176471, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 30027; Mature: 30027
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHVVASDLDGTLLSPDHTLSPYAKETLKLLTQRGVHFVFATGRHHIDVAQIRDNLEISA CCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHCCCEEEE FMITSNGARVHNTDGELIFSHNLAEDIARDLYGMLHNDPDITTNVYRNDDWFINRESPEQ EEEECCCCEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHH KEFFQESVFQYQLFEPGLLETDGVCKVYFTCDDHEKLLPLEDAINARWGDRVNVSFSFPT HHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCHH CLEVMAGGVSKGHALEEVAKIIGYTLKECIAFGDGMNDLEMLSMAGKGCIMRDAHQRLKD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHH KLPELEVIGSNVDDAVPHYLRKMFLG CCCCEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYHVVASDLDGTLLSPDHTLSPYAKETLKLLTQRGVHFVFATGRHHIDVAQIRDNLEISA CCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHCCCEEEE FMITSNGARVHNTDGELIFSHNLAEDIARDLYGMLHNDPDITTNVYRNDDWFINRESPEQ EEEECCCCEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHH KEFFQESVFQYQLFEPGLLETDGVCKVYFTCDDHEKLLPLEDAINARWGDRVNVSFSFPT HHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCHH CLEVMAGGVSKGHALEEVAKIIGYTLKECIAFGDGMNDLEMLSMAGKGCIMRDAHQRLKD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHH KLPELEVIGSNVDDAVPHYLRKMFLG CCCCEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]