| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is wecF
Identifier: 157368419
GI number: 157368419
Start: 191867
End: 192952
Strand: Direct
Name: wecF
Synonym: Spro_0170
Alternate gene names: 157368419
Gene position: 191867-192952 (Clockwise)
Preceding gene: 157368418
Following gene: 157368420
Centisome position: 3.52
GC content: 56.91
Gene sequence:
>1086_bases ATGACTACACTGATTCACGTATTGGGATCTGACATCCCGCATCACAATCAGACGGTGCTGCGTTTCTTCAACGACGTGTT GGCGAAGCGCTTGCCGTCCGATCAGACGCGTCATTTCATGGTGGCTGCCAAAGATGCCGCTGCGTTAGGGCCGTTCCCCG AGCTGAACCTTGAATGTCATCCGGACAAGAAAAGCCTGGCGATGGCGGTTATAGCCCGTGCTCAGGCCGATCGCGACCAG CGTTTCTTCTTCCATGGGCAGTTTAATCCGACGCTGTGGCTGGCATTGCTGAGCGGCAAAATCAAAGCCCATCAGGTCAG CTGGCATATCTGGGGTGCTGACCTGTATGAAAACGCCACCAGTTGGAAATTCCGCCTGTTCTATTTGCTGCGCCGCATTG CACAAGGCCGCGTCGGACGCGTATTCGCTACCCGTGGCGATGTGATCCACTATCAACAGCGGCATGCGCGTGTGCCTGCC TCCCTGCTGTATTTCCCGACGCGGATGGATCCGGCATTGACCGGTATCAGCGTCGAGAAAAATCTGGCCGGGCCGATGAC CATTCTGGTGGGTAACTCCGGCGATCGCACCAATCGGCACGTTGAGGCACTGAAAGCGATTCATCAACAGTTTGGCGCGG ATGTACGCGTGATCCTGCCGATGGGTTATCCGGCCAACAACGAGGCTTATATTGAACAGGTCCGCACTGCCGGGCTGGCG CTGTTCAGTGCCAGCAATCTGCAGGTGCTGACGCAGCAGGTGGCGTTCGACGACTACCTGAACATTCTGCGCGAGTGCGA TCTTGGCTACTTTATCTTTAACCGCCAACAGGGTATCGGCACGCTTTGCCTGTTGATCCAGTTTGGCGTGCCGTTCGTGC TGAGCCGGCAGAACCCGTTCTGGCAGGATCTGGCGGAGCAGCACCTGCCGGTGCTGTTCTACGGTGATTCTCTGGATGAG GCGGTAGTGCGTGAAGCGCAACGCCAACTGGCGTCAGTGGACAAGCAGGAGATCGCCTTCTTTAATCCCAACTACGTTGA TGGCTGGCAACAGGCATTAGCCCTGGCGGCAGGGGATAACTCATGA
Upstream 100 bases:
>100_bases CTTTGCACGGCGCGCTGGGTGCGGCACAGGCCTACATGGCAACCTACATCGTGTATTTCACGCTCTGTAGCTGCGTATTT ATTCTTTATCGTAGACGAGT
Downstream 100 bases:
>100_bases CGCTGGCGCAATTTGGCGGGTTATTTGTCGTCTACCTGATTGGCACGTTGTTTGTTCTGACGTTGACCTATCAGGAGTTT CGGCGCGTCCGTTTTAACTT
Product: 4-alpha-L-fucosyltransferase
Products: NA
Alternate protein names: TDP-Fuc4NAc:lipid II Fuc4NAc transferase; Fuc4NAc transferase
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTTLIHVLGSDIPHHNQTVLRFFNDVLAKRLPSDQTRHFMVAAKDAAALGPFPELNLECHPDKKSLAMAVIARAQADRDQ RFFFHGQFNPTLWLALLSGKIKAHQVSWHIWGADLYENATSWKFRLFYLLRRIAQGRVGRVFATRGDVIHYQQRHARVPA SLLYFPTRMDPALTGISVEKNLAGPMTILVGNSGDRTNRHVEALKAIHQQFGADVRVILPMGYPANNEAYIEQVRTAGLA LFSASNLQVLTQQVAFDDYLNILRECDLGYFIFNRQQGIGTLCLLIQFGVPFVLSRQNPFWQDLAEQHLPVLFYGDSLDE AVVREAQRQLASVDKQEIAFFNPNYVDGWQQALALAAGDNS
Sequences:
>Translated_361_residues MTTLIHVLGSDIPHHNQTVLRFFNDVLAKRLPSDQTRHFMVAAKDAAALGPFPELNLECHPDKKSLAMAVIARAQADRDQ RFFFHGQFNPTLWLALLSGKIKAHQVSWHIWGADLYENATSWKFRLFYLLRRIAQGRVGRVFATRGDVIHYQQRHARVPA SLLYFPTRMDPALTGISVEKNLAGPMTILVGNSGDRTNRHVEALKAIHQQFGADVRVILPMGYPANNEAYIEQVRTAGLA LFSASNLQVLTQQVAFDDYLNILRECDLGYFIFNRQQGIGTLCLLIQFGVPFVLSRQNPFWQDLAEQHLPVLFYGDSLDE AVVREAQRQLASVDKQEIAFFNPNYVDGWQQALALAAGDNS >Mature_360_residues TTLIHVLGSDIPHHNQTVLRFFNDVLAKRLPSDQTRHFMVAAKDAAALGPFPELNLECHPDKKSLAMAVIARAQADRDQR FFFHGQFNPTLWLALLSGKIKAHQVSWHIWGADLYENATSWKFRLFYLLRRIAQGRVGRVFATRGDVIHYQQRHARVPAS LLYFPTRMDPALTGISVEKNLAGPMTILVGNSGDRTNRHVEALKAIHQQFGADVRVILPMGYPANNEAYIEQVRTAGLAL FSASNLQVLTQQVAFDDYLNILRECDLGYFIFNRQQGIGTLCLLIQFGVPFVLSRQNPFWQDLAEQHLPVLFYGDSLDEA VVREAQRQLASVDKQEIAFFNPNYVDGWQQALALAAGDNS
Specific function: Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 56 family
Homologues:
Organism=Escherichia coli, GI48994971, Length=357, Percent_Identity=65.8263305322129, Blast_Score=495, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): WECF_SERP5 (A8G840)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001476408.1 - STRING: A8G840 - GeneID: 5605302 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0170 - eggNOG: NOG04337 - HOGENOM: HBG296660 - OMA: IVPMGYP - ProtClustDB: PRK02797 - BioCyc: SPRO399741:SPRO_0170-MONOMER - HAMAP: MF_01002 - InterPro: IPR009993
Pfam domain/function: PF07429 Fuc4NAc_transf
EC number: NA
Molecular weight: Translated: 40757; Mature: 40626
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLIHVLGSDIPHHNQTVLRFFNDVLAKRLPSDQTRHFMVAAKDAAALGPFPELNLECH CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCCEEEC PDKKSLAMAVIARAQADRDQRFFFHGQFNPTLWLALLSGKIKAHQVSWHIWGADLYENAT CCHHHHHHHHHHHHHCCCCCEEEEEECCCHHEEEEEHHCCCEEEEEEEEEECHHHHCCCC SWKFRLFYLLRRIAQGRVGRVFATRGDVIHYQQRHARVPASLLYFPTRMDPALTGISVEK CHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHHCCCHHHEEECCCCCCHHCCCEECC NLAGPMTILVGNSGDRTNRHVEALKAIHQQFGADVRVILPMGYPANNEAYIEQVRTAGLA CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHEE LFSASNLQVLTQQVAFDDYLNILRECDLGYFIFNRQQGIGTLCLLIQFGVPFVLSRQNPF EEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCH WQDLAEQHLPVLFYGDSLDEAVVREAQRQLASVDKQEIAFFNPNYVDGWQQALALAAGDN HHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHHHCCCC S C >Mature Secondary Structure TTLIHVLGSDIPHHNQTVLRFFNDVLAKRLPSDQTRHFMVAAKDAAALGPFPELNLECH CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCCEEEC PDKKSLAMAVIARAQADRDQRFFFHGQFNPTLWLALLSGKIKAHQVSWHIWGADLYENAT CCHHHHHHHHHHHHHCCCCCEEEEEECCCHHEEEEEHHCCCEEEEEEEEEECHHHHCCCC SWKFRLFYLLRRIAQGRVGRVFATRGDVIHYQQRHARVPASLLYFPTRMDPALTGISVEK CHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHHCCCHHHEEECCCCCCHHCCCEECC NLAGPMTILVGNSGDRTNRHVEALKAIHQQFGADVRVILPMGYPANNEAYIEQVRTAGLA CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHEE LFSASNLQVLTQQVAFDDYLNILRECDLGYFIFNRQQGIGTLCLLIQFGVPFVLSRQNPF EEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCH WQDLAEQHLPVLFYGDSLDEAVVREAQRQLASVDKQEIAFFNPNYVDGWQQALALAAGDN HHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHHHCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA