| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fdoG [H]
Identifier: 157368333
GI number: 157368333
Start: 87649
End: 90060
Strand: Direct
Name: fdoG [H]
Synonym: Spro_0084
Alternate gene names: 157368333
Gene position: 87649-90060 (Clockwise)
Preceding gene: 157368332
Following gene: 157368334
Centisome position: 1.61
GC content: 58.25
Gene sequence:
>2412_bases ATGACCAACCACTGGGTTGATATCAAGAACGCGAATCTGATTATCGTCATGGGCGGTAATGCGGCGGAAGCGCATCCGGT GGGGTTCCGCTGGGCGATGGAAGCCAAAATACACAATAAAGCCAAGCTGATCGTCATCGATCCGCGCTTTACCCGTACCG CATCGGTGGCGGATTTCTACACGCCGATCCGTTCCGGGACCGACATTGCCTTCCTGTCGGGCGTGTTGCTATACCTGATG ACCAACGACAAGATTAACCGCGAATACGTCCACGCCTATACCAACGCCAGCCTGCTGGTGCGGGAAGACTTTACCTTTGA AGACGGCCTGTTCAGCGGTTATGACGCGGAAAACCGCAAGTACGATAAAACCACCTGGAACTACCAGTTCGATGAAAACG GCTTTGCCAAGCGCGATCTGACGCTGCAGGACCCGCGTTGCGTGTGGAACCTGCTGAAACAGCACGTCAGCCGTTATACG CCGGAAGTGGTGAACAACATTTGCGGTACGCCGACCGAAGACTTCATCAAGGTCTGTGAATACATCGCCGAAACCTGCGT GGCGGATAAAACCGCGTCGTTCCTGTACGCCCTGGGCTGGACTCAGCACTCGGTCGGTTCGCAGAACATCCGCACCATGG CGATGATCCAGCTGTTGCTCGGAAACATGGGCATGGCGGGTGGCGGCGTCAACGCGCTGCGTGGCCACTCCAACATTCAG GGTCTGACCGACCTGGGCCTGCTGTCGCAGAGCCTGCCGGGCTATATGACGCTGCCGTCGGAGAAACAGACCGATATCGA CACCTACCTGAAAGCCAATACGCCGAAGGCGTTGCTGCCGGGCCAGGTGAACTACTGGAGCAACTACCCGAAATTCTTCG TCAGCATGATGAAGAGCTTCTATGGCGACAAGGCGCAGAAGGAAAACGGTTGGGGCTTTGACTGGCTGCCGAAGTGGGAC AAAGGCTACGACGTGCTGCAGTACTTCGAGCTGATGTCGCAAGGCAAGGTCAACGGTTACTTCTGCCAGGGCTTTAACCC GGTGGCGTCGTTCCCGAACAAGAACAAGGTGGTGGCCTCACTGTCAAAACTGAAGTTCCTGGTGACCATTGATCCGCTCA ATACCGAAACCTCCAACTTCTGGCAGAACCACGGCGAGTTCAACGACGTCGATCCGTCGAAGATTCAGACCGAGGTATTC CGGCTGCCGTCTAGCTGTTTCGCCGAAGAGAACGGTTCGATCGTGAACTCTGGGCGCTGGCTGCAATGGCACTGGAAAGG GGCTGATGCCCCAGGCGAGGCTAAGCACGACGGGGAAATCCTGGCGGGCATCTTCATCCGTCTGCGTGAGATGTATGCGC GTGACGGCGGTGCAGTACCGGAGCAGGTACTGAACATGACCTGGGATTACCTGACGCCGGAAGATCCTGCTTCGGAAGAA GTGGCGATGGAAAGCAACGGTAAGGCGCTGGCGGACGTTCTCGACGCCGACGGCAAAGTGCTGGCGAAAAAAGGTGAGCA GCTCAGCACCTTTGCCCACCTGCGTGACGACGGCACGACGGCCAGCGGCTGTTGGATCTTCGCCGGTAGCTGGACGCAGG CCGGTAACCAGATGGCGCGGCGCGATAACGCCGATCCGTCCGGCCTCGGCAATACGCTGGGTTGGGCCTGGGCCTGGCCG CTCAACCGCCGCATTCTGTATAACCGTGCTTCCGCTGACCCGCAGGGCAAGCCCTGGGATCCAAAACGTCAGTTGCTGGA ATGGGACGGCACCAAGTGGGGCGGGGTGGATATCCCGGACTACAGCGCCGCCGCACCGGGCAGTGACGTGGGGCCATTCA TCATGCAGCCGGAAGGCATGGGCCGTCTGTTTGCCACCGATAAAATGGCCGAAGGGCCGTTCCCGGAACACTACGAGCCG TTTGAAACGCCGCTCGGTACCAACCCGCTGCACCCGAACGTGGTTTCCAACCCGGCGGCAAGGGTGTTCAAGGACGATCT GGCGGCAATGGGCACTTCAGACAAGTTCCCGTATGTCGGCACTACCTACCGGTTGACCGAGCATTTCCACTACTGGACCA AGCACGCGATACTCAACGCCATCGCGCAGCCGGAACAGTTTGTGGAGATTGGCGAGAAACTGGCGGCGAAAAAAGGCATT CAGCACGGTGATACGGTGAAGGTCAGCTCCAACCGCGGCTTTATCAAGGCCAAGGCGGTGGTGACCAAACGTATCCGCAC CCTGCAGGTGAACGGCCAGGACGTCGACACCATAGGTATCCCGATCCACTGGGGTTACGAAGGGGTGGCGAAGAAAGGCT TTATTGCCAACACGCTGACGCCGTTTGTCGGTGATGCCAATACGCAAACGCCAGAGTTCAAGGCGTTCCTGGTCAACGTG GAAAAGGTGTAA
Upstream 100 bases:
>100_bases ATTTAGTCGCGCTCTCGGCATGCTTGCCGTAGACAACCAAGCACGTGTCTGACACGGACCAACGGTAGCAAGTCTTGCTC CAACATTTGGTCGCGGTGCG
Downstream 100 bases:
>100_bases CGGAGACGAATTATGGCAATGCAATCTCAGGACATCATTCGTAAATCCGCCACCAATGGTTTCACGCCGGCGCCGCGCGC CCGTGACCACCAGGAGGAAG
Product: formate dehydrogenase subunit alpha
Products: NA
Alternate protein names: Aerobic formate dehydrogenase major subunit; FDH-Z subunit alpha; Formate dehydrogenase-O subunit alpha [H]
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MTNHWVDIKNANLIIVMGGNAAEAHPVGFRWAMEAKIHNKAKLIVIDPRFTRTASVADFYTPIRSGTDIAFLSGVLLYLM TNDKINREYVHAYTNASLLVREDFTFEDGLFSGYDAENRKYDKTTWNYQFDENGFAKRDLTLQDPRCVWNLLKQHVSRYT PEVVNNICGTPTEDFIKVCEYIAETCVADKTASFLYALGWTQHSVGSQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSQSLPGYMTLPSEKQTDIDTYLKANTPKALLPGQVNYWSNYPKFFVSMMKSFYGDKAQKENGWGFDWLPKWD KGYDVLQYFELMSQGKVNGYFCQGFNPVASFPNKNKVVASLSKLKFLVTIDPLNTETSNFWQNHGEFNDVDPSKIQTEVF RLPSSCFAEENGSIVNSGRWLQWHWKGADAPGEAKHDGEILAGIFIRLREMYARDGGAVPEQVLNMTWDYLTPEDPASEE VAMESNGKALADVLDADGKVLAKKGEQLSTFAHLRDDGTTASGCWIFAGSWTQAGNQMARRDNADPSGLGNTLGWAWAWP LNRRILYNRASADPQGKPWDPKRQLLEWDGTKWGGVDIPDYSAAAPGSDVGPFIMQPEGMGRLFATDKMAEGPFPEHYEP FETPLGTNPLHPNVVSNPAARVFKDDLAAMGTSDKFPYVGTTYRLTEHFHYWTKHAILNAIAQPEQFVEIGEKLAAKKGI QHGDTVKVSSNRGFIKAKAVVTKRIRTLQVNGQDVDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKAFLVNV EKV
Sequences:
>Translated_803_residues MTNHWVDIKNANLIIVMGGNAAEAHPVGFRWAMEAKIHNKAKLIVIDPRFTRTASVADFYTPIRSGTDIAFLSGVLLYLM TNDKINREYVHAYTNASLLVREDFTFEDGLFSGYDAENRKYDKTTWNYQFDENGFAKRDLTLQDPRCVWNLLKQHVSRYT PEVVNNICGTPTEDFIKVCEYIAETCVADKTASFLYALGWTQHSVGSQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSQSLPGYMTLPSEKQTDIDTYLKANTPKALLPGQVNYWSNYPKFFVSMMKSFYGDKAQKENGWGFDWLPKWD KGYDVLQYFELMSQGKVNGYFCQGFNPVASFPNKNKVVASLSKLKFLVTIDPLNTETSNFWQNHGEFNDVDPSKIQTEVF RLPSSCFAEENGSIVNSGRWLQWHWKGADAPGEAKHDGEILAGIFIRLREMYARDGGAVPEQVLNMTWDYLTPEDPASEE VAMESNGKALADVLDADGKVLAKKGEQLSTFAHLRDDGTTASGCWIFAGSWTQAGNQMARRDNADPSGLGNTLGWAWAWP LNRRILYNRASADPQGKPWDPKRQLLEWDGTKWGGVDIPDYSAAAPGSDVGPFIMQPEGMGRLFATDKMAEGPFPEHYEP FETPLGTNPLHPNVVSNPAARVFKDDLAAMGTSDKFPYVGTTYRLTEHFHYWTKHAILNAIAQPEQFVEIGEKLAAKKGI QHGDTVKVSSNRGFIKAKAVVTKRIRTLQVNGQDVDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKAFLVNV EKV >Mature_802_residues TNHWVDIKNANLIIVMGGNAAEAHPVGFRWAMEAKIHNKAKLIVIDPRFTRTASVADFYTPIRSGTDIAFLSGVLLYLMT NDKINREYVHAYTNASLLVREDFTFEDGLFSGYDAENRKYDKTTWNYQFDENGFAKRDLTLQDPRCVWNLLKQHVSRYTP EVVNNICGTPTEDFIKVCEYIAETCVADKTASFLYALGWTQHSVGSQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQG LTDLGLLSQSLPGYMTLPSEKQTDIDTYLKANTPKALLPGQVNYWSNYPKFFVSMMKSFYGDKAQKENGWGFDWLPKWDK GYDVLQYFELMSQGKVNGYFCQGFNPVASFPNKNKVVASLSKLKFLVTIDPLNTETSNFWQNHGEFNDVDPSKIQTEVFR LPSSCFAEENGSIVNSGRWLQWHWKGADAPGEAKHDGEILAGIFIRLREMYARDGGAVPEQVLNMTWDYLTPEDPASEEV AMESNGKALADVLDADGKVLAKKGEQLSTFAHLRDDGTTASGCWIFAGSWTQAGNQMARRDNADPSGLGNTLGWAWAWPL NRRILYNRASADPQGKPWDPKRQLLEWDGTKWGGVDIPDYSAAAPGSDVGPFIMQPEGMGRLFATDKMAEGPFPEHYEPF ETPLGTNPLHPNVVSNPAARVFKDDLAAMGTSDKFPYVGTTYRLTEHFHYWTKHAILNAIAQPEQFVEIGEKLAAKKGIQ HGDTVKVSSNRGFIKAKAVVTKRIRTLQVNGQDVDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKAFLVNVE KV
Specific function: Allows to use formate as major electron donor during aerobic respiration. Subunit alpha possibly forms the active site [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI3868720, Length=804, Percent_Identity=85.8208955223881, Blast_Score=1470, Evalue=0.0, Organism=Escherichia coli, GI3868719, Length=803, Percent_Identity=76.587795765878, Blast_Score=1337, Evalue=0.0, Organism=Escherichia coli, GI3868721, Length=448, Percent_Identity=22.7678571428571, Blast_Score=115, Evalue=2e-26, Organism=Escherichia coli, GI87081797, Length=237, Percent_Identity=26.5822784810127, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787870, Length=234, Percent_Identity=26.4957264957265, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006443 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.2.1.2 [H]
Molecular weight: Translated: 89577; Mature: 89446
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNHWVDIKNANLIIVMGGNAAEAHPVGFRWAMEAKIHNKAKLIVIDPRFTRTASVADFY CCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCHHHHHH TPIRSGTDIAFLSGVLLYLMTNDKINREYVHAYTNASLLVREDFTFEDGLFSGYDAENRK HHHCCCCCHHHHHHHHEEEECCCCCCHHHEEEECCCEEEEEECCCCCCCCCCCCCCCCCC YDKTTWNYQFDENGFAKRDLTLQDPRCVWNLLKQHVSRYTPEVVNNICGTPTEDFIKVCE CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH YIAETCVADKTASFLYALGWTQHSVGSQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ HHHHHHHHHHHHHHHHEECCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC GLTDLGLLSQSLPGYMTLPSEKQTDIDTYLKANTPKALLPGQVNYWSNYPKFFVSMMKSF CHHHHHHHHHCCCCCEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH YGDKAQKENGWGFDWLPKWDKGYDVLQYFELMSQGKVNGYFCQGFNPVASFPNKNKVVAS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCHHHHH LSKLKFLVTIDPLNTETSNFWQNHGEFNDVDPSKIQTEVFRLPSSCFAEENGSIVNSGRW HHHEEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCEEECCCE LQWHWKGADAPGEAKHDGEILAGIFIRLREMYARDGGAVPEQVLNMTWDYLTPEDPASEE EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHCCCCCCCCCCCC VAMESNGKALADVLDADGKVLAKKGEQLSTFAHLRDDGTTASGCWIFAGSWTQAGNQMAR EEECCCCCHHHHHHCCCCCEEECCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH RDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGKPWDPKRQLLEWDGTKWGGVDIPD HCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC YSAAAPGSDVGPFIMQPEGMGRLFATDKMAEGPFPEHYEPFETPLGTNPLHPNVVSNPAA CCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RVFKDDLAAMGTSDKFPYVGTTYRLTEHFHYWTKHAILNAIAQPEQFVEIGEKLAAKKGI HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC QHGDTVKVSSNRGFIKAKAVVTKRIRTLQVNGQDVDTIGIPIHWGYEGVAKKGFIANTLT CCCCEEEECCCCCEEEHHHHHHHCEEEEEECCCCCEEEEEEEECCCHHHHCCCCCHHCCC PFVGDANTQTPEFKAFLVNVEKV CCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure TNHWVDIKNANLIIVMGGNAAEAHPVGFRWAMEAKIHNKAKLIVIDPRFTRTASVADFY CCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCHHHHHH TPIRSGTDIAFLSGVLLYLMTNDKINREYVHAYTNASLLVREDFTFEDGLFSGYDAENRK HHHCCCCCHHHHHHHHEEEECCCCCCHHHEEEECCCEEEEEECCCCCCCCCCCCCCCCCC YDKTTWNYQFDENGFAKRDLTLQDPRCVWNLLKQHVSRYTPEVVNNICGTPTEDFIKVCE CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH YIAETCVADKTASFLYALGWTQHSVGSQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ HHHHHHHHHHHHHHHHEECCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC GLTDLGLLSQSLPGYMTLPSEKQTDIDTYLKANTPKALLPGQVNYWSNYPKFFVSMMKSF CHHHHHHHHHCCCCCEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH YGDKAQKENGWGFDWLPKWDKGYDVLQYFELMSQGKVNGYFCQGFNPVASFPNKNKVVAS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCHHHHH LSKLKFLVTIDPLNTETSNFWQNHGEFNDVDPSKIQTEVFRLPSSCFAEENGSIVNSGRW HHHEEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCEEECCCE LQWHWKGADAPGEAKHDGEILAGIFIRLREMYARDGGAVPEQVLNMTWDYLTPEDPASEE EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHCCCCCCCCCCCC VAMESNGKALADVLDADGKVLAKKGEQLSTFAHLRDDGTTASGCWIFAGSWTQAGNQMAR EEECCCCCHHHHHHCCCCCEEECCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH RDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGKPWDPKRQLLEWDGTKWGGVDIPD HCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC YSAAAPGSDVGPFIMQPEGMGRLFATDKMAEGPFPEHYEPFETPLGTNPLHPNVVSNPAA CCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RVFKDDLAAMGTSDKFPYVGTTYRLTEHFHYWTKHAILNAIAQPEQFVEIGEKLAAKKGI HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC QHGDTVKVSSNRGFIKAKAVVTKRIRTLQVNGQDVDTIGIPIHWGYEGVAKKGFIANTLT CCCCEEEECCCCCEEEHHHHHHHCEEEEEECCCCCEEEEEEEECCCHHHHCCCCCHHCCC PFVGDANTQTPEFKAFLVNVEKV CCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503; 8522521 [H]