| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368309
Identifier: 157368309
GI number: 157368309
Start: 60170
End: 60922
Strand: Reverse
Name: 157368309
Synonym: Spro_0060
Alternate gene names: NA
Gene position: 60922-60170 (Counterclockwise)
Preceding gene: 157368310
Following gene: 157368308
Centisome position: 1.12
GC content: 58.17
Gene sequence:
>753_bases ATGACCAGAGAAATTATCATAGTGACCGGCGCCTATGGCACCGATACCGTCCAGCAGCTCGGTGGCCAGGCCGCTTTACT GCCGATCATCGCCGGTGCAGGTGCCGACGGCGTAGAAATTCGCCGCGAACTGTTTTCTGCTCAGGAGCTACAGGCCCTGC CGGCTCTGGCTCAGGCCATCGAACAGCAGCAACTGTTTGCCGTTTATTCCGCACCTGAAGCCCTGTTTACCCCGCAGCAC ACGCTGAACCCAAATCTGCCTGCACTGCTGGCGGAAGCCCAGACGTTGAATGCGCGCCAGTTAAAATTATCCCTGGGCCA TTACCAGCCGGGCTTCGATTTTACCGAACTGAAAGTGGCACTGGAGCAGCATCCGGTCAACCTGGTGGTGGAAAATGACC AGACCCCGGACTGCGGCATTCTGTCACTGCTGAACGCCTTTTTCCACGCGGCGGAAGATAACCGTCTGCCGGTCAGCATG ACTTTCGATATGGCCAACTGGCACTGGGTCGGGCAAGACGCCTTCGCCGCTGCCGAGCGCCTGGCCCGCCACGTCAGCTA CGTTCACGTTAAAGCCGCCACTCATAGCCTGAAAGGCTGGCGTGCCGTGGCGCTGGACGACAGTGACGGTAAATGGCGTG AGTTGCTAACCCGTCTGCCGCAGGATGTTCCACGTGGCATTGAATTCCCATTACAGGGTGACAGTCTGGAAGACGTAACC CGCTACTACGTTAACCTGTTACGCGCGGAGTAA
Upstream 100 bases:
>100_bases GCGATCATATTTTTACACTCTGTCGCTTTTGTCTGGAACCGGTACCATTTAACTTGTGGTTAACAGTATCGGTGGGACTG ACACCACCTCAGGAGCAAAA
Downstream 100 bases:
>100_bases AACATCATGACAACGCTGACAGCCGCGCATAGCGCACCTTTGGACGTCGTCACCTTGGGTGAAGCCATGGCCATGTTCGT GGCAAGCCAAACCGGCGATA
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Epimerase; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase-Like TIM Barrel; Epimerase KguE; Xylose Isomerase Domain-Containing Protein TIM Barrel; Sugar Isomerase; Sugar Isomerase/Epimerase; Epimerase KguE-Like; Sugar Phosphatase Isomerase/Epimerase; Sugar Or Sugar Phosphate Isomerase; Sugar Phosphate Isomerases/Epimerase
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTREIIIVTGAYGTDTVQQLGGQAALLPIIAGAGADGVEIRRELFSAQELQALPALAQAIEQQQLFAVYSAPEALFTPQH TLNPNLPALLAEAQTLNARQLKLSLGHYQPGFDFTELKVALEQHPVNLVVENDQTPDCGILSLLNAFFHAAEDNRLPVSM TFDMANWHWVGQDAFAAAERLARHVSYVHVKAATHSLKGWRAVALDDSDGKWRELLTRLPQDVPRGIEFPLQGDSLEDVT RYYVNLLRAE
Sequences:
>Translated_250_residues MTREIIIVTGAYGTDTVQQLGGQAALLPIIAGAGADGVEIRRELFSAQELQALPALAQAIEQQQLFAVYSAPEALFTPQH TLNPNLPALLAEAQTLNARQLKLSLGHYQPGFDFTELKVALEQHPVNLVVENDQTPDCGILSLLNAFFHAAEDNRLPVSM TFDMANWHWVGQDAFAAAERLARHVSYVHVKAATHSLKGWRAVALDDSDGKWRELLTRLPQDVPRGIEFPLQGDSLEDVT RYYVNLLRAE >Mature_249_residues TREIIIVTGAYGTDTVQQLGGQAALLPIIAGAGADGVEIRRELFSAQELQALPALAQAIEQQQLFAVYSAPEALFTPQHT LNPNLPALLAEAQTLNARQLKLSLGHYQPGFDFTELKVALEQHPVNLVVENDQTPDCGILSLLNAFFHAAEDNRLPVSMT FDMANWHWVGQDAFAAAERLARHVSYVHVKAATHSLKGWRAVALDDSDGKWRELLTRLPQDVPRGIEFPLQGDSLEDVTR YYVNLLRAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27603; Mature: 27471
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREIIIVTGAYGTDTVQQLGGQAALLPIIAGAGADGVEIRRELFSAQELQALPALAQAI CCCEEEEEECCCCCHHHHHHCCCEEEEHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH EQQQLFAVYSAPEALFTPQHTLNPNLPALLAEAQTLNARQLKLSLGHYQPGFDFTELKVA HHHHHHHEECCCHHHCCCCCCCCCCCHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHH LEQHPVNLVVENDQTPDCGILSLLNAFFHAAEDNRLPVSMTFDMANWHWVGQDAFAAAER HHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECHHHHHHHHH LARHVSYVHVKAATHSLKGWRAVALDDSDGKWRELLTRLPQDVPRGIEFPLQGDSLEDVT HHHHHHHEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHCHHHCCCCCCCCCCCCCHHHHH RYYVNLLRAE HHHHHHHHCC >Mature Secondary Structure TREIIIVTGAYGTDTVQQLGGQAALLPIIAGAGADGVEIRRELFSAQELQALPALAQAI CCEEEEEECCCCCHHHHHHCCCEEEEHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH EQQQLFAVYSAPEALFTPQHTLNPNLPALLAEAQTLNARQLKLSLGHYQPGFDFTELKVA HHHHHHHEECCCHHHCCCCCCCCCCCHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHH LEQHPVNLVVENDQTPDCGILSLLNAFFHAAEDNRLPVSMTFDMANWHWVGQDAFAAAER HHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECHHHHHHHHH LARHVSYVHVKAATHSLKGWRAVALDDSDGKWRELLTRLPQDVPRGIEFPLQGDSLEDVT HHHHHHHEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHCHHHCCCCCCCCCCCCCHHHHH RYYVNLLRAE HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA