Definition Pseudomonas fluorescens Pf-5 chromosome, complete genome.
Accession NC_004129
Length 7,074,893

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The map label for this gene is rpoS

Identifier: 157169065

GI number:

Start: 1381383

End: 1382390

Strand: Direct

Name: rpoS

Synonym: PFL_1207

Alternate gene names: NA

Gene position: NA

Preceding gene: 70728588

Following gene: 70728592

Centisome position: NA

GC content: NA

Gene sequence:

>1008_bases
ATGGCTCTCAGTAAAGAAGTGCCGGAGTTTGACATCGACGATGAGGTTCTCCTTATGGAGAGCAGCATCGATATGGATTC
GATGTCGAATAATGAGGGGGCAACTCCACCTTCCGTTCGCACCAAATCCAAAAGCTCCGCTTCATTAAAGCAACACAAAT
ACATTGATTACACGCGTGCACTCGATGCGACGCAGCTGTACCTCAATGAAATCGGCTTTTCTCCATTGCTCTCCCCCGAA
GAGGAAGTGCACTTTGCGCGGTTGTCGCAAAGTGGTGATCCGGCCGGGCGCAAGCGCATGATTGAAAGCAACTTGCGGCT
GGTGGTGAAAATCGCCCGGCGCTATGTCAATCGTGGCCTGTCGCTGCTGGACCTGATCGAAGAGGGCAACCTCGGGCTGA
TCCGAGCGGTGGAGAAGTTCGATCCGGAACGCGGCTTCCGCTTCTCGACCTATGCCACCTGGTGGATTCGTCAGACCATC
GAGCGGGCCATCATGAATCAGACCCGGACCATCCGGTTGCCGATCCATGTGGTCAAAGAACTCAACGTCTACTTGCGCGC
CGCCCGTGAGTTGACGCAAAAACTCGATCATGAACCCTCCCCCGAAGAAATCGCCAACCTGCTGGAGAAGCCGGTGGCCG
AAGTCAAGCGCATGCTCGGCCTGAACGAGCGGGTTTCTTCGGTTGATGTCTCCCTGGGCCCGGATTCGGACAAGACCCTG
CTGGATACCCTGACCGACGACCGTCCGACAGATCCTTGTGAGCTGTTGCAGGACGACGATCTGTCACAAAGTATCGATCA
GTGGCTTTCCGAATTGACCGAGAAGCAGCGCGAAGTGGTGGTTCGACGCTTCGGTCTGCGTGGACACGAGAGCAGCACCC
TTGAAGATGTGGGCCTGGAGATCGGTCTGACCCGTGAGCGGGTTCGGCAGATCCAGGTTGAAGGGCTCAAGCGCCTTCGG
GAAATTCTCGAGAAGAATGGATTGTCCAGTGAGTCGCTGTTTCAGTAG

Upstream 100 bases:

>100_bases
ACCAGCCTGTTCCGCTCACGTAGAGGGAACAGGCTCCAGCGTTGCCAGGGATAAAGGCGCCGCTTGAGCCTGAGGTCGAA
CTCACCAAAGGACTATAACA

Downstream 100 bases:

>100_bases
CCACTGGATCGATTCACAAGAGCCCCGATCGACTCGGGGCTTTTTATTGCACGCAGCTTGTGGTTTTGAATGGGCTATTG
CCAGAGAAGTTGGCTTAACT

Product: RNA polymerase sigma factor RpoS

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>335_residues
MALSKEVPEFDIDDEVLLMESSIDMDSMSNNEGATPPSVRTKSKSSASLKQHKYIDYTRALDATQLYLNEIGFSPLLSPE
EEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTI
ERAIMNQTRTIRLPIHVVKELNVYLRAARELTQKLDHEPSPEEIANLLEKPVAEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDQWLSELTEKQREVVVRRFGLRGHESSTLEDVGLEIGLTRERVRQIQVEGLKRLR
EILEKNGLSSESLFQ

Sequences:
NA

Specific function: NA

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA