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The map label for this gene is rpoC

Identifier: 157164541

GI number:

Start: 664992

End: 669506

Strand: Direct

Name: rpoC

Synonym: CCC13826_0175

Alternate gene names: NA

Gene position: NA

Preceding gene: 342649734

Following gene: 157163865

Centisome position: NA

GC content: NA

Gene sequence:

>4515_bases
ATGAAACTAACTAATTTAAAACCAGTTGAGATAAAAGAAGAGCATAGACCTCGTGATTTTGAAGCTTTCCAACTTCGTTT
AGCAAGTCCTGAGAAGATAAAATCTTGGAGTTATGGCGAGGTTAAAAAACCAGAAACTATCAACTACCGCACGCTAAAAC
CTGAGCGTGACGGCTTGTTTTGTGCCAAAATTTTCGGACCGATCCGTGACTACGAGTGTCTTTGTGGTAAATATAAAAAG
ATGCGCTATAAAGGTATCAAGTGTGAAAAGTGCGGCGTTGAAGTAACAACATCTAAGGTTCGTCGCTCTCGCATGGGTCA
TATCGAGCTTGTAACTCCAGTGGCTCACATCTGGTATGTAAATTTCTTGCCAAGCCGTATAGGTGCGCTTCTTGGTATCA
AGATGAAAGACCTTGAGCGCGTACTTTACTATGAGGCATACATTGTTGATAATGCTGGCGAGGCTTACTATGACAATGAA
AATTCTAAAAAAGTTGAAAAATATGACGTTTTAAACGAGGAGCAATATCAAAGCCTAGCTTCAAGATATGAAGAGACTGG
CTTTACAGCAAGAATGGGTGGCGAGGTCATCTATGATATGCTAGCTGAGCTTGATCTAACTCAAATTTTAAATCAACTAA
AAGAAGAGATGGAAGCTACAAATTCTGAGGCTAAGAAAAAAACCATCGTAAAACGCCTAAAAGTTATCGAGAGCTTTTTA
AATTCAGGCAACCGCCCAGAGTGGATGATGATAACAAATTTACCAGTTCTTCCGCCTGACCTTAGACCACTTGTTAATCT
TGATGGCGGTAAATTTGCTGTTTCAGACGTAAACGACCTATATCGCCGTGTAATAAATAGAAATAGCCGTCTAAAACGCC
TGCTTGAGCTTGACGCACCTGAGATCATTATCAGAAACGAAAAGAGAATGCTTCAAGAGGCTGTTGATGCACTATTTGAT
AATGGCCGTAGAGCAAATGCAGTAAAAGGTGCAAATAAACGCCCACTAAAATCACTAAGTGAGATCATCAAAGGTAAGCA
AGGCCGCTTCCGTCAGAATTTGCTAGGTAAGCGTGTTGATTTCTCTGGACGTTCTGTTATCGTCGTTGGTCCAAAGCTAA
AGATGGATCAGTGCGGTCTTCCAAAGAAGATGGCTTTAGAGCTATTTAAACCACATTTGCTTGCTCGCCTTGAAGAAAAA
GGCTATGCGACAACTGTTAAGCAAGCTAAAAAGATGATAGAAGATAAGACAAATGAGGTTTGGGAGTGCCTAGAAGAGGT
CGTTAAAGACTATCCAGTTATGCTAAACCGTGCTCCGACACTTCACAAGCTCTCTATCCAGGCGTTTCACCCAGTGCTTG
TTGAGGGCAAGGCGATCCAGCTTCACCCGTTAGTTTGTGCGGCGTTCAACGCTGACTTTGACGGCGACCAAATGGCTGTT
CACGTGCCACTATCTCAAGAGGCTATCGCTGAGTGCAAAATTTTGATGCTTAGCTCAATGAACATCTTGCTTCCTGCAAG
CGGTAAGGCTATCACAGTCCCTTCACAAGATATGGTTTTAGGAATTTATTACCTAAGCTTAGAGAGAAATGACGAAAAAG
GTGCAAATAAAATTTTCTCAAGCGTCGATGAAGTAATGATCGCTGAGGAGGCTAATACCCTTGGTCTTCACGCTAAAATT
AAGACAATGGTTGATAATAAGATCATCTTTACAACGGCTGGTCGCTTGATCCTAAGAGCGATACTACCTGATTTTGTCCC
TGAAAATATGTGGAATAAGATCATGAAGAAAAAAGACATTGCAAATTTGGTTGATTATGTTTATAGAAATGGCGGCCTTG
AAGTAACGGCCGACTTCCTTGATAAGCTTAAAAATTTAGGCTTTAGATATGCTACAAAAGCGGGAATTTCTATCTCTATC
GCAGACATCATCGTGCCAGATAGCAAGCAAAAATATATCGACGAAGCCAAGAAAAAAGTTCGTGAAATTCAAAAGCAATA
CGGTGCTGGTCTTTTAACAGATAGTGAGAGATATAACAAGATCATCGATATCTGGACAGATACAAATAACAGCGTTGCAA
GCGAGATGATGAAGCTTATCCAAAGCGATAAGGGTGGATTTAACTCAATTTATATGATGGCTGACTCAGGTGCGAGAGGT
AGTGCAGCGCAAATTCGCCAGCTAGCTGGTATGCGTGGTCTTATGGCAAAACCAGATGGCTCGATCATCGAAACACCGAT
CATTTCAAACTTCCGTGAAGGTCTAAACATAATGGAGTACTTCAACTCAACCCACGGAGCTAGAAAAGGTCTTGCAGATA
CCGCGCTAAAAACTGCCAACGCTGGTTACCTAACAAGAAAACTAATCGACGTTGCTCAAAACGTTAAAGTGACAATGCAC
GATTGCGGTACTCACGAGGGCGTTGAGATCACAGATATCACAGAGAGTGGCGAGCTAATAGAGAGCCTTGAAGAGAGAGT
ATTAGGGCGTGTTTTAGCAGATGATGTGATCGATCCTATAACAAATGAAATTTTATTTAGCGAAGGCACTTTACTTGATG
AAGAGAAAGCTAAGGCTATAACAGAAGCTGGCATAAAATCAGTAAGTATTAGAACACCTATCACGTGCAAGGCGCCAAAA
GGCGTTTGCGCAAAATGCTACGGATTAAATTTGGGCGAGGGCAAACTTGTAAAACCAGGCGAGGCTGTCGGTATCATCTC
GGCTCAATCAATCGGTGAGCCAGGTACTCAGCTAACGCTAAGAACATTCCACATTGGTGGTACGGCTTCTACTGAGCAAC
AAGACCGCCAAGTCATCGCTCAAAAAGAGGGCTTTATTAGGTATTACAACCTTAGTACATACGAGAACAACGGCAAAAAG
ATCGTTGCAAACAGAAGAAGTGCAGCTGTGCTACTTGTTGAGCCAAAGATAAAATCAACAATTGATGGTAAAATCGAGAT
CGAATATGCTCACGAAGACGTAAATATCGTTATCAAAGGCAAAAAAGAAGAGATCAAATATACTATCAGAAGAAACGACC
TTGCTAAACCAAACGAACTAGCTGGCGTTAGTGGTAAGATCGAAGGCAAGATGTATATCCCTTATGCAAATGGCGACAAG
GTAAAAGAGAATGAGAGTATCGTCGAGATCATAAAAGAGGGTTGGAATATCCCAAATCGTATCCCTTATGCTAGTGAGCT
TAAAATTTCAGATGGCGATCCAGTAACTAGAAAGATCACAGCAGATGCAAATGGTGTGGTTAAATTTTTCATACTAAAAG
GTGACTTCCTTGATAGACTAAAAGATATCAAAAAAGGTCACAAAGTAACTGAAAAAGGCTTCTTTGTTGTCGTCTCTGAC
AAGGACGGACGTGAGGCAGTTCGCCACTACATCCCAAGAAATTCTATCATCCAAGTATCAGATAATGATGCGGTAGAAAG
AGCGACAGTGGTCTCACTACCTGAAAAAGATGACAAGCTAATAATCGCTGAGTGGGATCCATACTCAACTCCAACTATCG
CAGAAGAGGCTGGTGTGGTTAGTTTTGAAGATGTCGAGCCAGGATATAGTGCGACTGAGCAAGCTGACGAGGCAACTGGT
CAAAGACGTCTTGTTATCAACGAGTATTTGCCAAGCGGCGTAAAACCAGCGATCATTATCACTACAAAGAGCGGACATTT
GATAAAGTATCCGCTTGATCCAAAAACTGCGATCTTTGTTTCAAGTGGCGACGAAGTGGCCCAAGCTGACATTTTGGCTA
AGACTCCAAAAGCTGTTGCTAAGTCAAAAGACATTACCGGTGGTCTTCCAAGAGTTAGTGAGCTATTTGAAGCAAGACGC
CCTAAAAATACAGCTATCGTTGCAGAGATCGATGGCGTTGTTAGATTTGACAAGCCACTTCGCTCAAAAGAGCGCATCAT
CATCCAAGCAGAAGATGGCACGACAGCTGAGTATTTGATCGAGAAGAGCCGCCAGATCCAAGTAAGAGACGGAGAATTTG
TTCATGCTGGTGAGAAACTGACAGACGGACTTATCTCAAGCCACGATATCTTAAGAATTCTTGGTGAAAAGGCGCTTCAC
TACTATTTGATCAGTGAAATTCAGCAAGTTTATCGCCGCCAAGGTGTTGCGATCGCTGATAAGCATATCGAGATCATCGT
CTCTCAAATGCTTCGCCAAGTCAAAATCGTCGATAGTGGAAATACAAATTTCATCGTTGGCGACATGGTTTCAAGAAACA
AATTTAAAGAAGAGAATGAGCGCATCATGAAAATGGGTGGCGAGCCAGCTATTGCTGAACCGATCCTTCTTGGTGTTACA
AGAGCGGCTATCGGAAGTGATAGTGTGATCTCTGCTGCATCATTCCAAGAGACAACTAAGGTCTTAACAGAAGCGTCAAT
CGCTGCTAAATTTGACTATCTTGAAGATCTAAAAGAGAACGTCATCCTTGGACGTATGATCCCAGTTGGTACTGGTTTTT
ATAAAGATAAAAAGATAAAGATCAAAGAAAACTAA

Upstream 100 bases:

>100_bases
AACGTTCCTGAGACTGGTATCCCTGAGACGTTCTTTGTTCTAACAAACGAGCTAAAATCACTAGCTCTTGATGTGGAAGT
ATATGATGAGGATGAGACAA

Downstream 100 bases:

>100_bases
TATATTAAGCCCCACCTCTGGGGCTTAATCCTCTTATAAATTTACCCACTTAAATTTACAAAATTTCAAAATTTACAAGC
CATTAATCAATATTAAATAA

Product: DNA-directed RNA polymerase, beta' subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1504_residues
MKLTNLKPVEIKEEHRPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCAKIFGPIRDYECLCGKYKK
MRYKGIKCEKCGVEVTTSKVRRSRMGHIELVTPVAHIWYVNFLPSRIGALLGIKMKDLERVLYYEAYIVDNAGEAYYDNE
NSKKVEKYDVLNEEQYQSLASRYEETGFTARMGGEVIYDMLAELDLTQILNQLKEEMEATNSEAKKKTIVKRLKVIESFL
NSGNRPEWMMITNLPVLPPDLRPLVNLDGGKFAVSDVNDLYRRVINRNSRLKRLLELDAPEIIIRNEKRMLQEAVDALFD
NGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLKMDQCGLPKKMALELFKPHLLARLEEK
GYATTVKQAKKMIEDKTNEVWECLEEVVKDYPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAV
HVPLSQEAIAECKILMLSSMNILLPASGKAITVPSQDMVLGIYYLSLERNDEKGANKIFSSVDEVMIAEEANTLGLHAKI
KTMVDNKIIFTTAGRLILRAILPDFVPENMWNKIMKKKDIANLVDYVYRNGGLEVTADFLDKLKNLGFRYATKAGISISI
ADIIVPDSKQKYIDEAKKKVREIQKQYGAGLLTDSERYNKIIDIWTDTNNSVASEMMKLIQSDKGGFNSIYMMADSGARG
SAAQIRQLAGMRGLMAKPDGSIIETPIISNFREGLNIMEYFNSTHGARKGLADTALKTANAGYLTRKLIDVAQNVKVTMH
DCGTHEGVEITDITESGELIESLEERVLGRVLADDVIDPITNEILFSEGTLLDEEKAKAITEAGIKSVSIRTPITCKAPK
GVCAKCYGLNLGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHIGGTASTEQQDRQVIAQKEGFIRYYNLSTYENNGKK
IVANRRSAAVLLVEPKIKSTIDGKIEIEYAHEDVNIVIKGKKEEIKYTIRRNDLAKPNELAGVSGKIEGKMYIPYANGDK
VKENESIVEIIKEGWNIPNRIPYASELKISDGDPVTRKITADANGVVKFFILKGDFLDRLKDIKKGHKVTEKGFFVVVSD
KDGREAVRHYIPRNSIIQVSDNDAVERATVVSLPEKDDKLIIAEWDPYSTPTIAEEAGVVSFEDVEPGYSATEQADEATG
QRRLVINEYLPSGVKPAIIITTKSGHLIKYPLDPKTAIFVSSGDEVAQADILAKTPKAVAKSKDITGGLPRVSELFEARR
PKNTAIVAEIDGVVRFDKPLRSKERIIIQAEDGTTAEYLIEKSRQIQVRDGEFVHAGEKLTDGLISSHDILRILGEKALH
YYLISEIQQVYRRQGVAIADKHIEIIVSQMLRQVKIVDSGNTNFIVGDMVSRNKFKEENERIMKMGGEPAIAEPILLGVT
RAAIGSDSVISAASFQETTKVLTEASIAAKFDYLEDLKENVILGRMIPVGTGFYKDKKIKIKEN

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA