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The map label for this gene is ytfB

Identifier: 157163677

GI number: 157163677

Start: 4461171

End: 4461809

Strand: Reverse

Name: ytfB

Synonym: EcHS_A4456

Alternate gene names: 157163677

Gene position: 4461809-4461171 (Counterclockwise)

Preceding gene: 157163680

Following gene: 157163675

Centisome position: 96.09

GC content: 55.56

Gene sequence:

>639_bases
ATGCCCGGGCGCTTTGAACTAAAACCAACCCTGGAGAAAGTCTGGCACGCGCCGGACAATTTTCGCTTCATGGACCCGCT
GCCGCCGATGCATCGTCGGGGGATCATTATTGCCGCCATTGTATTGGTGGTCGGATTTCTGCTTCCATCTGATGATACGC
CCAACGCGCCGGTGGTGACGCGTGAAGCGCAGTTAGATATTCAGTCGCAATCACAACCGCCGACAGAAGAACAGCTGCGG
GCGCAATTAGTCACCCCACAAAATGATCCTGATCAGGTGGCTCCGGTCGCTCCAGAACCTATACAGGAAGGCCAGCCAGA
AGAGCAGCCGCAAACTACCCAAACGCAACCATTCCAGCCAGATAGCGGAATTGATAATCAATGGCGCTCTTACCGTGTCG
AACCCGGTAAAACGATGGCGCAGCTGTTCCGCGACCACGGACTGCCCGCTACCGATGTCTATGCAATGGCGCAGGTAGAA
GGCGCGGGTAAGCCGCTGAGTAATTTGCAAAACGGGCAAATGGTGAAAATCCGCCAGAACGCCAGCGGCGTGGTGACGGG
CTTAACCATTGATACGGGGAATAATCAACAGGTCCTGTTTACCCGCCAGCCGGATGGCAGTTTTATTCGTGCGCGGTAG

Upstream 100 bases:

>100_bases
CCCGTATGAATATAATAAAGGCGGGTTTACCACGGACATCATAGCGTTAGCTTATTCATAGGCTATGATTGAGGAACAAG
ACGCGGAGCAGGAGGAAACC

Downstream 100 bases:

>100_bases
ATGAAGGGTCAACCAAAAGCCAGCTAAGGATTGTCTCTTTGATGACCTTACGTCTGGCTTCCAGTGCCTGGGGGGAAACC
ATACTGATATGATAAACCAG

Product: opacity-associated family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLR
AQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVE
GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR

Sequences:

>Translated_212_residues
MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLR
AQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVE
GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
>Mature_211_residues
PGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRA
QLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEG
AGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR

Specific function: Unknown

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082389, Length=212, Percent_Identity=100, Blast_Score=429, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTFB_ECOLI (P39310)

Other databases:

- EMBL:   U14003
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S56431
- RefSeq:   AP_004706.1
- RefSeq:   NP_418627.4
- ProteinModelPortal:   P39310
- SMR:   P39310
- STRING:   P39310
- EnsemblBacteria:   EBESCT00000003174
- EnsemblBacteria:   EBESCT00000015155
- GeneID:   948727
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5745
- KEGG:   eco:b4206
- EchoBASE:   EB2395
- EcoGene:   EG12502
- eggNOG:   COG3061
- GeneTree:   EBGT00050000010532
- HOGENOM:   HBG416800
- OMA:   GIDQQWR
- ProtClustDB:   CLSK880866
- BioCyc:   EcoCyc:G7864-MONOMER
- Genevestigator:   P39310
- InterPro:   IPR013731
- InterPro:   IPR007340

Pfam domain/function: PF04225 OapA; PF08525 OapA_N

EC number: NA

Molecular weight: Translated: 23506; Mature: 23375

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x4050ecc4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVT
CCCCCCCCHHHHHHHCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEE
REAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQP
ECCEECCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
DSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQN
CCCCCCHHHEEECCCCHHHHHHHHHCCCCHHHHHEEEEECCCCCCHHHCCCCCEEEEEEC
ASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
CCCEEEEEEEECCCCCEEEEEECCCCCEEECH
>Mature Secondary Structure 
PGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVT
CCCCCCCHHHHHHHCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEE
REAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQP
ECCEECCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
DSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQN
CCCCCCHHHEEECCCCHHHHHHHHHCCCCHHHHHEEEEECCCCCCHHHCCCCCEEEEEEC
ASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
CCCEEEEEEEECCCCCEEEEEECCCCCEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503