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The map label for this gene is yiiZ [H]

Identifier: 157163669

GI number: 157163669

Start: 4451404

End: 4452375

Strand: Reverse

Name: yiiZ [H]

Synonym: EcHS_A4448

Alternate gene names: 157163669

Gene position: 4452375-4451404 (Counterclockwise)

Preceding gene: 157163670

Following gene: 157163664

Centisome position: 95.88

GC content: 44.65

Gene sequence:

>972_bases
ATGAAAATAAAAGTATCCGCTGGCATTATCGGTGCTGTTCTTATGTTATCCGCAAGCCAGTCCTGGGCAGTGACATTAAA
ACTGAGTCATAATCAGGATAAGTCTCATCCTGTTCATAAAGCGATGGAGTTCTTTGCGAAAAAGAGCAAAGAGTACTCTA
ACGGTGATATTACTATTCGTATTTATCCAAATGGAACATTGGGTACTCAACGAGAAACAATGGAGCTGATTCGTTCTGGC
GCTATTCCCCTGGTAAAAACCAATGCGGCAGAAATGGAAGCATTTGAAAATTCCTATAAATTATTTAGCCTGCCTTATTT
GTTCCGCGATCGTGATCATTATTATCAGGTCATGCAGGGCGATATCGGGAGAAAAATCCTCGACTCAACGAAAAGCAAAG
GTTATTTCGGGCTGACTTTTTATGATGGAGGCGCCCGCAGTTTCTATGGCAATAAACCAGTACTGAAACCAGACGATCTG
AAAGGCATGAAAGTCCGTGTCCAGCCAAGCCCTGGCGCAGTTGAAATGATCAAAGTCATGGGCGGTAACCCGACGCCACT
GGATTACGGCGAGTTGTATACAGCCTTACAGCAGGGTGTGGTCGATATGGCAGAAAACAGCGTGATGGCGCTGACTACCA
TGCGTCACGGTGAAGTGGCAAAATCCTTCAGCCTTGACGAACACACTATGGTTCCCGATGTGGTTCTGATGAGCAATGCT
GCGTTTGATAAACTTAGCCCGGAAAATCAGGCAGTTATATTAAAAGCAGCTAAAGAATCAATGAGCTACATGAAAGACTT
GTGGAGCGAGGAAGAGAAACAAGAATTTGCAAAACTGGATAAAATGGGCGTGAAAGTCTACCAGGTAGATAAAGCTCCGT
TTATCGAGAAAGTACAGCCAATGTACGCAAACTTCGCTAAGGACAACCCAGCCCTTGCCCCAATGCTGGCTGATATTCAG
GCAGCTAAGTAA

Upstream 100 bases:

>100_bases
TATATTCCGCAAATCAGTATGGCATTGCCAAGAGCACTGGGCTACTGATGCGCATTCACTGGCGGCACCTGCCGCCATAT
TTATTAGAAAAGGAACATCT

Downstream 100 bases:

>100_bases
TTATCTTCGTAGGGCTGCTTATTGTGGCCCTTATCGATATCTGCAAGTGCTCGCTACAAAAGCAAAACGCCGACCAATGG
TCGGCGTTTTTACGTCTCGT

Product: TRAP transporter solute receptor DctP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKIKVSAGIIGAVLMLSASQSWAVTLKLSHNQDKSHPVHKAMEFFAKKSKEYSNGDITIRIYPNGTLGTQRETMELIRSG
AIPLVKTNAAEMEAFENSYKLFSLPYLFRDRDHYYQVMQGDIGRKILDSTKSKGYFGLTFYDGGARSFYGNKPVLKPDDL
KGMKVRVQPSPGAVEMIKVMGGNPTPLDYGELYTALQQGVVDMAENSVMALTTMRHGEVAKSFSLDEHTMVPDVVLMSNA
AFDKLSPENQAVILKAAKESMSYMKDLWSEEEKQEFAKLDKMGVKVYQVDKAPFIEKVQPMYANFAKDNPALAPMLADIQ
AAK

Sequences:

>Translated_323_residues
MKIKVSAGIIGAVLMLSASQSWAVTLKLSHNQDKSHPVHKAMEFFAKKSKEYSNGDITIRIYPNGTLGTQRETMELIRSG
AIPLVKTNAAEMEAFENSYKLFSLPYLFRDRDHYYQVMQGDIGRKILDSTKSKGYFGLTFYDGGARSFYGNKPVLKPDDL
KGMKVRVQPSPGAVEMIKVMGGNPTPLDYGELYTALQQGVVDMAENSVMALTTMRHGEVAKSFSLDEHTMVPDVVLMSNA
AFDKLSPENQAVILKAAKESMSYMKDLWSEEEKQEFAKLDKMGVKVYQVDKAPFIEKVQPMYANFAKDNPALAPMLADIQ
AAK
>Mature_323_residues
MKIKVSAGIIGAVLMLSASQSWAVTLKLSHNQDKSHPVHKAMEFFAKKSKEYSNGDITIRIYPNGTLGTQRETMELIRSG
AIPLVKTNAAEMEAFENSYKLFSLPYLFRDRDHYYQVMQGDIGRKILDSTKSKGYFGLTFYDGGARSFYGNKPVLKPDDL
KGMKVRVQPSPGAVEMIKVMGGNPTPLDYGELYTALQQGVVDMAENSVMALTTMRHGEVAKSFSLDEHTMVPDVVLMSNA
AFDKLSPENQAVILKAAKESMSYMKDLWSEEEKQEFAKLDKMGVKVYQVDKAPFIEKVQPMYANFAKDNPALAPMLADIQ
AAK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=311, Percent_Identity=27.9742765273312, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35966; Mature: 35966

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKVSAGIIGAVLMLSASQSWAVTLKLSHNQDKSHPVHKAMEFFAKKSKEYSNGDITIR
CEEEEECCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
IYPNGTLGTQRETMELIRSGAIPLVKTNAAEMEAFENSYKLFSLPYLFRDRDHYYQVMQG
EEECCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHC
DIGRKILDSTKSKGYFGLTFYDGGARSFYGNKPVLKPDDLKGMKVRVQPSPGAVEMIKVM
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEHEEC
GGNPTPLDYGELYTALQQGVVDMAENSVMALTTMRHGEVAKSFSLDEHTMVPDVVLMSNA
CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCCCCCCEEEECCC
AFDKLSPENQAVILKAAKESMSYMKDLWSEEEKQEFAKLDKMGVKVYQVDKAPFIEKVQP
CCCCCCCCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH
MYANFAKDNPALAPMLADIQAAK
HHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKIKVSAGIIGAVLMLSASQSWAVTLKLSHNQDKSHPVHKAMEFFAKKSKEYSNGDITIR
CEEEEECCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
IYPNGTLGTQRETMELIRSGAIPLVKTNAAEMEAFENSYKLFSLPYLFRDRDHYYQVMQG
EEECCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHC
DIGRKILDSTKSKGYFGLTFYDGGARSFYGNKPVLKPDDLKGMKVRVQPSPGAVEMIKVM
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEHEEC
GGNPTPLDYGELYTALQQGVVDMAENSVMALTTMRHGEVAKSFSLDEHTMVPDVVLMSNA
CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCCCCCCEEEECCC
AFDKLSPENQAVILKAAKESMSYMKDLWSEEEKQEFAKLDKMGVKVYQVDKAPFIEKVQP
CCCCCCCCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH
MYANFAKDNPALAPMLADIQAAK
HHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]