| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is 157163282
Identifier: 157163282
GI number: 157163282
Start: 4022267
End: 4023736
Strand: Reverse
Name: 157163282
Synonym: EcHS_A4030
Alternate gene names: NA
Gene position: 4023736-4022267 (Counterclockwise)
Preceding gene: 157163283
Following gene: 157163281
Centisome position: 86.65
GC content: 49.25
Gene sequence:
>1470_bases ATGCACTATCGCAATGTGGTTTGTTTGTTGTCTTGTTCATTGTTCTTATCATCGGCATGGGGATGTCGGCTTGATGAGCC GGAACATAATATTTACCAGAAACAAGGAAAAGGCGTGGTGTACCTGCGCCCTTATGAAAAGACCAATCTTTCGCTACCGC AGATTAACTACAAGCGTCTGCGTCTGTTACCGAATTTGTTAATTGACCCAACAAAACTGAAGGATTGGGAAACGGTGCCC CCGGCTACTGATCTCACGACAGACGTTGTCTACAGCGGCGCAAACGCAACTCTTCCCCATTACTCTTACTATAGCGATGG TCGCGCTATTCTCTACGCTGGCGAGATTGTGCAAAACCCTCCAGGCACACCGCCAGTCGATATCTCGTCATTTCAGGCAT GGGGTGATTTTGCCGCAGATAAGTACAGCCTCTATTACGAAGGCAAACGCACCGATAGCAACCAGCAACTAAACCGCCGA ACGTTGCGTCAGGTAGAATTTAACCCGCAATGGAAACCAGACTGGCTAGGTTTGATTCTCCGTGACAAGCATTATCTTTA CGCAAATGGTCAGCGCCTTGATGATCCTGACACCTTTACGGTACTGGCACAAAAATCATGGGATCAGCGCGGTAAATTCT CTACAGCATTCAATCCCTGCCTTCCTGCCCCATTTGGCCCCTGGGATACCCTGGCTCGTACACGGACCAAAATCCTGATC AACAGCGAACAGCTTGATGCCGACCCGAACACCTTTTCCGTCGTACGCTGGATGCCCGGCTCACTCTTGACCTGGCGTGA TAAAAACGGGCTACAGCGTAAAGTCCTCGACAAGGAAAATCTGGCGTGGGATGAAGATTTAACAAAGCACTGTCTGGATT TTTCTCTGCTGGAAAAGAAAGTGTTCTGGCGTAAAGGGCCTGCTTGTAAACAGGAAGAATTACCCGGACTCGATCCGGAA CAGTTTCACCCCATCAGTGATGCTGTCGCCCAGTATCAGGACTCGCTTTATACCATCATCGAAACAGAGTCTGGTGACCG CAAGCTGGAGATCGTGAAACTTGATGATCCCAATCTTATTATCAACAAACGTTTCAACGCCGGGAAACGCCACGGCTATT TACTTACGCGTGCCGAAGGGTGGCCATACCATTCCGGTTTACACGTGTTTGAATCTGACGGACCGCTGATCTTACTGGAT AACCACTCTCCGGATGAACGCGAAGCCCATCTTAATGACCATCCCTTTTTGCGCAGATGGTATGCCCGCGATAACCGCTA CGTTTACAGCTTTGATGGCGCGCAGCTCTGGCGATACCGCACCGCTGATCCGAAACAAGTTCGCTTAATCTGGAAGGAAC AACATTCGGGATATGGCTATGGCGTAAATTACAAAACGGGATATCTGGACGGAAAAATTACTGATGACGGCGAATTTATT CCTGCCCCGCGCAATGAGGCGACAAAATGA
Upstream 100 bases:
>100_bases TTCTGAAAAGTGACGATTTGCCGCAAAAGTTACGCTTACGTGCGGGGAATTATGTTCTGCTGGTAGTTTCGTGATCGGCA CCTCGCGCCAGGATGGCTTT
Downstream 100 bases:
>100_bases ATGGTCAAATAATCACAGTTGCACTCATCCTGTTGGGGCACATATTTCTGACGCCTGCTGTACAGGCCATAGGGTTCGAC TATTACAATGATCACGGTGT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MHYRNVVCLLSCSLFLSSAWGCRLDEPEHNIYQKQGKGVVYLRPYEKTNLSLPQINYKRLRLLPNLLIDPTKLKDWETVP PATDLTTDVVYSGANATLPHYSYYSDGRAILYAGEIVQNPPGTPPVDISSFQAWGDFAADKYSLYYEGKRTDSNQQLNRR TLRQVEFNPQWKPDWLGLILRDKHYLYANGQRLDDPDTFTVLAQKSWDQRGKFSTAFNPCLPAPFGPWDTLARTRTKILI NSEQLDADPNTFSVVRWMPGSLLTWRDKNGLQRKVLDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPE QFHPISDAVAQYQDSLYTIIETESGDRKLEIVKLDDPNLIINKRFNAGKRHGYLLTRAEGWPYHSGLHVFESDGPLILLD NHSPDEREAHLNDHPFLRRWYARDNRYVYSFDGAQLWRYRTADPKQVRLIWKEQHSGYGYGVNYKTGYLDGKITDDGEFI PAPRNEATK
Sequences:
>Translated_489_residues MHYRNVVCLLSCSLFLSSAWGCRLDEPEHNIYQKQGKGVVYLRPYEKTNLSLPQINYKRLRLLPNLLIDPTKLKDWETVP PATDLTTDVVYSGANATLPHYSYYSDGRAILYAGEIVQNPPGTPPVDISSFQAWGDFAADKYSLYYEGKRTDSNQQLNRR TLRQVEFNPQWKPDWLGLILRDKHYLYANGQRLDDPDTFTVLAQKSWDQRGKFSTAFNPCLPAPFGPWDTLARTRTKILI NSEQLDADPNTFSVVRWMPGSLLTWRDKNGLQRKVLDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPE QFHPISDAVAQYQDSLYTIIETESGDRKLEIVKLDDPNLIINKRFNAGKRHGYLLTRAEGWPYHSGLHVFESDGPLILLD NHSPDEREAHLNDHPFLRRWYARDNRYVYSFDGAQLWRYRTADPKQVRLIWKEQHSGYGYGVNYKTGYLDGKITDDGEFI PAPRNEATK >Mature_489_residues MHYRNVVCLLSCSLFLSSAWGCRLDEPEHNIYQKQGKGVVYLRPYEKTNLSLPQINYKRLRLLPNLLIDPTKLKDWETVP PATDLTTDVVYSGANATLPHYSYYSDGRAILYAGEIVQNPPGTPPVDISSFQAWGDFAADKYSLYYEGKRTDSNQQLNRR TLRQVEFNPQWKPDWLGLILRDKHYLYANGQRLDDPDTFTVLAQKSWDQRGKFSTAFNPCLPAPFGPWDTLARTRTKILI NSEQLDADPNTFSVVRWMPGSLLTWRDKNGLQRKVLDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPE QFHPISDAVAQYQDSLYTIIETESGDRKLEIVKLDDPNLIINKRFNAGKRHGYLLTRAEGWPYHSGLHVFESDGPLILLD NHSPDEREAHLNDHPFLRRWYARDNRYVYSFDGAQLWRYRTADPKQVRLIWKEQHSGYGYGVNYKTGYLDGKITDDGEFI PAPRNEATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56655; Mature: 56655
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYRNVVCLLSCSLFLSSAWGCRLDEPEHNIYQKQGKGVVYLRPYEKTNLSLPQINYKRL CCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHH RLLPNLLIDPTKLKDWETVPPATDLTTDVVYSGANATLPHYSYYSDGRAILYAGEIVQNP HHHHHHHCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCEEECCCCEEEEECHHHCCC PGTPPVDISSFQAWGDFAADKYSLYYEGKRTDSNQQLNRRTLRQVEFNPQWKPDWLGLIL CCCCCCCCCCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE RDKHYLYANGQRLDDPDTFTVLAQKSWDQRGKFSTAFNPCLPAPFGPWDTLARTRTKILI ECCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEE NSEQLDADPNTFSVVRWMPGSLLTWRDKNGLQRKVLDKENLAWDEDLTKHCLDFSLLEKK ECHHCCCCCCCEEEEEECCCCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VFWRKGPACKQEELPGLDPEQFHPISDAVAQYQDSLYTIIETESGDRKLEIVKLDDPNLI HHHCCCCCCCHHCCCCCCHHHCCCHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCEE INKRFNAGKRHGYLLTRAEGWPYHSGLHVFESDGPLILLDNHSPDEREAHLNDHPFLRRW EECCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEECCCCCCHHHCCCCCCHHHHHH YARDNRYVYSFDGAQLWRYRTADPKQVRLIWKEQHSGYGYGVNYKTGYLDGKITDDGEFI HHCCCCEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCEECCCEECEECCEECCCCCCC PAPRNEATK CCCCCCCCC >Mature Secondary Structure MHYRNVVCLLSCSLFLSSAWGCRLDEPEHNIYQKQGKGVVYLRPYEKTNLSLPQINYKRL CCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHH RLLPNLLIDPTKLKDWETVPPATDLTTDVVYSGANATLPHYSYYSDGRAILYAGEIVQNP HHHHHHHCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCEEECCCCEEEEECHHHCCC PGTPPVDISSFQAWGDFAADKYSLYYEGKRTDSNQQLNRRTLRQVEFNPQWKPDWLGLIL CCCCCCCCCCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE RDKHYLYANGQRLDDPDTFTVLAQKSWDQRGKFSTAFNPCLPAPFGPWDTLARTRTKILI ECCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEE NSEQLDADPNTFSVVRWMPGSLLTWRDKNGLQRKVLDKENLAWDEDLTKHCLDFSLLEKK ECHHCCCCCCCEEEEEECCCCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VFWRKGPACKQEELPGLDPEQFHPISDAVAQYQDSLYTIIETESGDRKLEIVKLDDPNLI HHHCCCCCCCHHCCCCCCHHHCCCHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCEE INKRFNAGKRHGYLLTRAEGWPYHSGLHVFESDGPLILLDNHSPDEREAHLNDHPFLRRW EECCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEECCCCCCHHHCCCCCCHHHHHH YARDNRYVYSFDGAQLWRYRTADPKQVRLIWKEQHSGYGYGVNYKTGYLDGKITDDGEFI HHCCCCEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCEECCCEECEECCEECCCCCCC PAPRNEATK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA