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The map label for this gene is yiaB

Identifier: 157163040

GI number: 157163040

Start: 3756710

End: 3757051

Strand: Reverse

Name: yiaB

Synonym: EcHS_A3766

Alternate gene names: 157163040

Gene position: 3757051-3756710 (Counterclockwise)

Preceding gene: 157163041

Following gene: 157163039

Centisome position: 80.91

GC content: 41.52

Gene sequence:

>342_bases
ATGAAAACCTCAAAGACTGTGGCAAAACTATTATTTGTTGTCGGGGCGCTGGTTTATCTGGTTGGGCTATGGATCTCATG
CCCATTGTTAAGTGGAAAAGGCTATTTTCTTGGCGTGTTAATGACAGCAACTTTTGGCAACTATGCATATCTTCGCGCAG
AAAAACTCGGGCAACTGGATGATTTTTTTACCCATATCTGCCAGTTAGTTGCGTTAATCACTATCGGTCTCTTGTTTATC
GGTGTTTTAAACGCACCTATCAATACTTATGAAATGGTGATCTATCCCATCGCCTTTTTTGTCTGCTTGTTTGGTCAAAT
GCGTTTGTTTCGCTCGGCATGA

Upstream 100 bases:

>100_bases
TAGTATGAATTTATTCTGAAAATCATTTGTTAATGGCATTTTTCAGTTTTGTCTTTCGTTGGTTACTCGTAATGTATCGC
TGGTAGATATGGAGATCGTT

Downstream 100 bases:

>100_bases
GCAACATAAAGCTCTTACATATTCAGGAATGAAAGGAATACTGTGATGGACAACAAAATATCAACCTATTCACCAGCCTT
TAGTATTGTGTCATGGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFTHICQLVALITIGLLFI
GVLNAPINTYEMVIYPIAFFVCLFGQMRLFRSA

Sequences:

>Translated_113_residues
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFTHICQLVALITIGLLFI
GVLNAPINTYEMVIYPIAFFVCLFGQMRLFRSA
>Mature_113_residues
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFTHICQLVALITIGLLFI
GVLNAPINTYEMVIYPIAFFVCLFGQMRLFRSA

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082293, Length=113, Percent_Identity=100, Blast_Score=228, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIAB_ECOLI (P11286)

Other databases:

- EMBL:   X04691
- EMBL:   U00039
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S47784
- RefSeq:   AP_004229.1
- RefSeq:   NP_418020.2
- ProteinModelPortal:   P11286
- STRING:   P11286
- EnsemblBacteria:   EBESCT00000004968
- EnsemblBacteria:   EBESCT00000018128
- GeneID:   948152
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5654
- KEGG:   eco:b3563
- EchoBASE:   EB1246
- EcoGene:   EG11267
- eggNOG:   COG4682
- GeneTree:   EBGT00050000009929
- HOGENOM:   HBG467984
- OMA:   LYGASAT
- ProtClustDB:   PRK11403
- BioCyc:   EcoCyc:EG11267-MONOMER
- Genevestigator:   P11286
- InterPro:   IPR008024

Pfam domain/function: PF05360 YiaAB

EC number: NA

Molecular weight: Translated: 12555; Mature: 12555

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x159e6a90)-; HASH(0x171d1018)-; HASH(0x171daf6c)-; HASH(0x14e6acc0)-;

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHH
DFFTHICQLVALITIGLLFIGVLNAPINTYEMVIYPIAFFVCLFGQMRLFRSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHH
DFFTHICQLVALITIGLLFIGVLNAPINTYEMVIYPIAFFVCLFGQMRLFRSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503