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The map label for this gene is ldrD [H]

Identifier: 157163011

GI number: 157163011

Start: 3729451

End: 3729726

Strand: Reverse

Name: ldrD [H]

Synonym: EcHS_A3736

Alternate gene names: 157163011

Gene position: 3729726-3729451 (Counterclockwise)

Preceding gene: 157163012

Following gene: 157163009

Centisome position: 80.32

GC content: 52.9

Gene sequence:

>276_bases
GTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAGAGAGAAAACCCCCGCACGTTGCAGGTAT
GCACCTGACAACATCACGGGGGCTAATCTTGAACCCAAACAACTCAAGAATAGCCGCGAAACGTTGGCATTACAACACAG
GCGGCTATATGACGCTCGCAGAACTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCC
AGTATGATCGTGAACTGGCTGAATAAGCGGAAGTAA

Upstream 100 bases:

>100_bases
TAAAGAAATTAAGCTGGAAGGCATCGCGCAATGAGGAAGATTGCCGGGTGCTGACAGTAAAAAGCAATCGTAGAATCAGC
GGCAAGCCGGAAAGGTTCCG

Downstream 100 bases:

>100_bases
CGTGTCATGCGGGCGTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGTGAAACTCTGCGGCCTTTT
TCGTAAGAAAAATGCAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MRRNVAGALSLVALVAGERKPPHVAGMHLTTSRGLILNPNNSRIAAKRWHYNTGGYMTLAELGMAFWHDLAAPVIAGILA
SMIVNWLNKRK

Sequences:

>Translated_91_residues
MRRNVAGALSLVALVAGERKPPHVAGMHLTTSRGLILNPNNSRIAAKRWHYNTGGYMTLAELGMAFWHDLAAPVIAGILA
SMIVNWLNKRK
>Mature_91_residues
MRRNVAGALSLVALVAGERKPPHVAGMHLTTSRGLILNPNNSRIAAKRWHYNTGGYMTLAELGMAFWHDLAAPVIAGILA
SMIVNWLNKRK

Specific function: Toxic peptide whose overexpression causes rapid cell killing and nucleoid condensation of the host cell. Overexpression induces stress-response and a number of membrane protein genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the toxic peptide ldr family [H]

Homologues:

Organism=Escherichia coli, GI48994945, Length=35, Percent_Identity=97.1428571428571, Blast_Score=72, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9960; Mature: 9960

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNVAGALSLVALVAGERKPPHVAGMHLTTSRGLILNPNNSRIAAKRWHYNTGGYMTLA
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCCEEEEECEEECCCCCHHHH
ELGMAFWHDLAAPVIAGILASMIVNWLNKRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRNVAGALSLVALVAGERKPPHVAGMHLTTSRGLILNPNNSRIAAKRWHYNTGGYMTLA
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCCEEEEECEEECCCCCHHHH
ELGMAFWHDLAAPVIAGILASMIVNWLNKRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]