| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is yhiD
Identifier: 157162986
GI number: 157162986
Start: 3696566
End: 3697213
Strand: Reverse
Name: yhiD
Synonym: EcHS_A3710
Alternate gene names: 157162986
Gene position: 3697213-3696566 (Counterclockwise)
Preceding gene: 157162987
Following gene: 157162978
Centisome position: 79.62
GC content: 45.37
Gene sequence:
>648_bases ATGACAGCAGAATTTATTATACGTCTTATACTCGCGGCAATTGCCTGTGGCGCTATTGGCATGGAAAGGCAAATGCGCGG CAAAGGAGCAGGGTTACGCACACATGTATTAATTGGCATGGGAAGCGCCCTGTTTATGATTGTTTCGAAATATGGTTTTG CTGATGTGCTGTCTTTAGATCACGTCGGACTCGACCCCAGCCGTATTGCTGCTCAGGTGGTGACGGGCGTCGGGTTTATC GGTGCAGGTAACATTCTCGTTCGTAACCAAAATATTGTAGGTCTGACGACGGCAGCGGATATCTGGGTGACCGCCGCCAT AGGTATGGTTATTGGCAGCGGTATGTACGAACTGGGTATTTATGGTTCAGTGATGACCTTGTTGGTGCTGGAAGTCTTCC ATCAATTAACCTTCCGCCTGATGAACAAAAATTACCATTTACAGCTGACATTAGTGAACGGTAATACGGTATCAATGCTC GACTGGTTTAAGCAGCAAAAAATAAAAACTGATTTAGTTTCGTTGCAGGAAAATGAAGATCATGAAGTGGTCGCCATTGA TATCCAGCTTCATGCCACAACGTCGATAGAAGACCTGTTGCGATTATTAAAAGGTATGGCAGGGGTGAAAGGCGTTTCAA TTAGCTAA
Upstream 100 bases:
>100_bases CTTCAAAAATCAAGCATCTAATGACTTGCCGAATTAATGAGGTACAAGTAAAAAGGAGTAGCAAGTTGAGCCATCTTGCT GCTCCTTTTTGCATTTTTAT
Downstream 100 bases:
>100_bases TCTGTGTGGCAGCGTAGCCAGACTCACCGTAAGCCTGAAATTCACACCAGATAATCAATATGCTGATGGCGTACCAGCTC ATTGATCCGCTTAAGATTGA
Product: putative Mg(2+) transport ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFI GAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSML DWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS
Sequences:
>Translated_215_residues MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFI GAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSML DWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS >Mature_214_residues TAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIG AGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLD WFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family
Homologues:
Organism=Escherichia coli, GI1789924, Length=215, Percent_Identity=100, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YHID_ECO57 (P0AFV3)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: D91177 - PIR: E86023 - RefSeq: NP_290088.1 - RefSeq: NP_312415.1 - ProteinModelPortal: P0AFV3 - EnsemblBacteria: EBESCT00000024937 - EnsemblBacteria: EBESCT00000056618 - GeneID: 915755 - GeneID: 961160 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z4920 - KEGG: ecs:ECs4388 - GeneTree: EBGT00050000011526 - HOGENOM: HBG708751 - OMA: IGVERES - ProtClustDB: PRK09977 - BioCyc: ECOL83334:ECS4388-MONOMER - InterPro: IPR003416 - PRINTS: PR01837
Pfam domain/function: PF02308 MgtC
EC number: NA
Molecular weight: Translated: 23214; Mature: 23083
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x169f3a74)-; HASH(0x1379cf20)-; HASH(0x18520fd0)-; HASH(0x1834a010)-; HASH(0x17a0e4f0)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLD CCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHC HVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGI CCCCCHHHHHHHHHHHCCEEECCCEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHH YGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENED HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCC HEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS CEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCH >Mature Secondary Structure TAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLD CHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHC HVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGI CCCCCHHHHHHHHHHHCCEEECCCEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHH YGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENED HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCC HEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS CEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796