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The map label for this gene is cfaA [H]

Identifier: 157162574

GI number: 157162574

Start: 3294553

End: 3295269

Strand: Reverse

Name: cfaA [H]

Synonym: EcHS_A3280

Alternate gene names: 157162574

Gene position: 3295269-3294553 (Counterclockwise)

Preceding gene: 157162578

Following gene: 157162573

Centisome position: 70.96

GC content: 38.49

Gene sequence:

>717_bases
ATGGTGGCGAAAATTAATCTCTTATCACGGCTTACGCCGCTTTTATTCGTGTTCGCTCCTTTTTTTGCACAGTCAAATAT
GACTGTTTATCCTATGGCTGTTTCCATTAATAGTCAGGGGGAAGGTAACGTTCGCGTAATATCTAAAAGTAATGAAGTTC
AATATATAAAAGCGACGGTATTTCGTATTGATAATCCTTCAACGCCTCAAGAGCAGGAAGTTGAAATAAAATCCGGAGAT
GCCACTCATCTTGTAGTGATGCCGCCTAAGTTTGCGCTGCCAGCGGGTAGCAGTAAGACTGTGCGCTTTGTTGCAATGGA
ACCAGAGCAAAAAGAAAAAAATTATCGCGTTAAATTTGAAGCGGTTCCCAGTATTGATGACGTTGCCACGGATAAAAAAG
ATCTCTCTATGCAGTTAACAGTTAACTTAATTTGGGGGATTGTTGTTAGTGTCCCACCTCAGCAACCTATTGCTAAGTTA
GAAGTAAATGCTGCCCAAAAATTAGTTAATGCAGGGAATCAACGCTTAAAGATTTTAACGATCGCTTATTGTAAAAATAA
TAGCAAAGAAAATTGTAAGATACAGACTGTAAATAAAAATATCTTCCCTGGTCAGGAAAGAAATCTTGAAAGCATATCTG
GCTACGACAAAATCGTTGTCAAATATAATAACTGGATCACCAAAGATAATGGCGAGTTTGAACTGGCGGTCCATTAA

Upstream 100 bases:

>100_bases
TTTAATATTAACTAAAAATACTTTTTCATGTTGACTTACAATAAATATACACATCTAATGCACTAACTTTTTTGAATCAA
TATTGTAAGATCAAATCTAT

Downstream 100 bases:

>100_bases
TTATCATTGTAATAAACGAAGGAATAGTAATGAAAAAGGTATTTGCAAAATCTCTTCTGGTCGCAGCGATGTTTTCTGTT
GCAGGCTCCGCATTAGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Colonization factor antigen I subunit A [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MVAKINLLSRLTPLLFVFAPFFAQSNMTVYPMAVSINSQGEGNVRVISKSNEVQYIKATVFRIDNPSTPQEQEVEIKSGD
ATHLVVMPPKFALPAGSSKTVRFVAMEPEQKEKNYRVKFEAVPSIDDVATDKKDLSMQLTVNLIWGIVVSVPPQQPIAKL
EVNAAQKLVNAGNQRLKILTIAYCKNNSKENCKIQTVNKNIFPGQERNLESISGYDKIVVKYNNWITKDNGEFELAVH

Sequences:

>Translated_238_residues
MVAKINLLSRLTPLLFVFAPFFAQSNMTVYPMAVSINSQGEGNVRVISKSNEVQYIKATVFRIDNPSTPQEQEVEIKSGD
ATHLVVMPPKFALPAGSSKTVRFVAMEPEQKEKNYRVKFEAVPSIDDVATDKKDLSMQLTVNLIWGIVVSVPPQQPIAKL
EVNAAQKLVNAGNQRLKILTIAYCKNNSKENCKIQTVNKNIFPGQERNLESISGYDKIVVKYNNWITKDNGEFELAVH
>Mature_238_residues
MVAKINLLSRLTPLLFVFAPFFAQSNMTVYPMAVSINSQGEGNVRVISKSNEVQYIKATVFRIDNPSTPQEQEVEIKSGD
ATHLVVMPPKFALPAGSSKTVRFVAMEPEQKEKNYRVKFEAVPSIDDVATDKKDLSMQLTVNLIWGIVVSVPPQQPIAKL
EVNAAQKLVNAGNQRLKILTIAYCKNNSKENCKIQTVNKNIFPGQERNLESISGYDKIVVKYNNWITKDNGEFELAVH

Specific function: Might function as a shuttle protein in the transport of fimbria through the periplasmic space or might function as an adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26598; Mature: 26598

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKINLLSRLTPLLFVFAPFFAQSNMTVYPMAVSINSQGEGNVRVISKSNEVQYIKATV
CEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEE
FRIDNPSTPQEQEVEIKSGDATHLVVMPPKFALPAGSSKTVRFVAMEPEQKEKNYRVKFE
EEECCCCCCCCCEEEEECCCCEEEEEECCCEECCCCCCCEEEEEEECCCCCCCCEEEEEE
AVPSIDDVATDKKDLSMQLTVNLIWGIVVSVPPQQPIAKLEVNAAQKLVNAGNQRLKILT
ECCCCHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHCCCCEEEEEE
IAYCKNNSKENCKIQTVNKNIFPGQERNLESISGYDKIVVKYNNWITKDNGEFELAVH
EEEECCCCCCCCEEEEECCCCCCCCCCCCHHCCCCEEEEEEECCEEECCCCEEEEEEC
>Mature Secondary Structure
MVAKINLLSRLTPLLFVFAPFFAQSNMTVYPMAVSINSQGEGNVRVISKSNEVQYIKATV
CEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEE
FRIDNPSTPQEQEVEIKSGDATHLVVMPPKFALPAGSSKTVRFVAMEPEQKEKNYRVKFE
EEECCCCCCCCCEEEEECCCCEEEEEECCCEECCCCCCCEEEEEEECCCCCCCCEEEEEE
AVPSIDDVATDKKDLSMQLTVNLIWGIVVSVPPQQPIAKLEVNAAQKLVNAGNQRLKILT
ECCCCHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHCCCCEEEEEE
IAYCKNNSKENCKIQTVNKNIFPGQERNLESISGYDKIVVKYNNWITKDNGEFELAVH
EEEECCCCCCCCEEEEECCCCCCCCCCCCHHCCCCEEEEEEECCEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2569152; 1352712 [H]