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The map label for this gene is mqsR

Identifier: 157162498

GI number: 157162498

Start: 3213079

End: 3213375

Strand: Reverse

Name: mqsR

Synonym: EcHS_A3200

Alternate gene names: 157162498

Gene position: 3213375-3213079 (Counterclockwise)

Preceding gene: 157162499

Following gene: 157162497

Centisome position: 69.2

GC content: 40.07

Gene sequence:

>297_bases
ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAG
TGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACT
TTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTT
TATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA

Upstream 100 bases:

>100_bases
TGGTCACTATCTCCGTACATCTAACTAACCTTTTAGGTGCTTTTTCATTGCTGTAATTAACCTTTTAGGTTATAACTAAA
GTAACAGGGAGGCGGGGGTT

Downstream 100 bases:

>100_bases
TATGAAATGTCCGGTTTGCCACCAGGGAGAAATGGTTTCTGGCATTAAAGATATTCCATACACCTTCCGTGGACGAAAAA
CAGTATTGAAAGGTATCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK

Sequences:

>Translated_98_residues
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK
>Mature_98_residues
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK

Specific function: AI-2 controlled regulator that controls biofilm formation. Controls biofilm formation by inducing motility through the activation of qseBC and csrA. This leads to the activation of the master flagellum regulon flhDC, of fliA, motA and crl

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789399, Length=98, Percent_Identity=100, Blast_Score=204, Evalue=7e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MQSR_ECOLI (Q46865)

Other databases:

- EMBL:   U28377
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D65089
- RefSeq:   AP_003572.1
- RefSeq:   NP_417494.1
- PDB:   3HI2
- PDBsum:   3HI2
- ProteinModelPortal:   Q46865
- SMR:   Q46865
- STRING:   Q46865
- EnsemblBacteria:   EBESCT00000003136
- EnsemblBacteria:   EBESCT00000015251
- GeneID:   947500
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2990
- KEGG:   eco:b3022
- EchoBASE:   EB2841
- EcoGene:   EG13023
- eggNOG:   NOG77853
- GeneTree:   EBGT00050000012064
- HOGENOM:   HBG678443
- OMA:   MEKGTPH
- ProtClustDB:   CLSK881375
- BioCyc:   EcoCyc:G7572-MONOMER
- BioCyc:   MetaCyc:G7572-MONOMER
- Genevestigator:   Q46865

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11232; Mature: 11232

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTT
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCCEEEEEECCCCHHHHHHHC
YSDHTIWQDVYRPRLVTGQVYLKITVIHDVLIVSFKEK
CCCCHHHHHHCCCEEECCEEEEEEEEEHHEEHEEECCC
>Mature Secondary Structure
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTT
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCCEEEEEECCCCHHHHHHHC
YSDHTIWQDVYRPRLVTGQVYLKITVIHDVLIVSFKEK
CCCCHHHHHHCCCEEECCEEEEEEEEEHHEEHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503