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The map label for this gene is ssnA

Identifier: 157162340

GI number: 157162340

Start: 3046675

End: 3048003

Strand: Direct

Name: ssnA

Synonym: EcHS_A3039

Alternate gene names: 157162340

Gene position: 3046675-3048003 (Clockwise)

Preceding gene: 157162339

Following gene: 157162341

Centisome position: 65.61

GC content: 52.67

Gene sequence:

>1329_bases
ATGTTGATTCTGAAGAATGTCACTGCGGTACAGCTACACCCGGCAAAAGTGCAGGAAGGCGTTGATATCGCCATCGAAAA
CGATGTGATTGTCGCTATCGGCGATGCCCTGACGCAACGCTACCCCGACGCCAGCTTCAAAGAGATGCATGGCCGGATTG
TGATGCCAGGGATTGTCTGCTCGCACAACCATTTTTACTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGC
CCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGG
ACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCG
GGTCGCTCTCCACATTGCGCGACGCATTTTTAAAAGTTGGCCTGCGCGCGATGACCTGTTTTGAAACTACTGACCGTAAC
AACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGAC
AAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGC
GTGAAGCCGTGAAAGCCACAGGCCGTGGTTTGCATATTCACGCTGCGGAAGACCTTTACGACGTTTCCTACAGTCACCAC
TGGTACGGCAAAGACCTGCTGGCACGACTGGCGCAATTCGATCTCATCGACAGCAAAACGCTGGTCGCTCATGGGCTGTA
CTTGTCGAAAGATGACATCACCCTACTCAATCAGCGCGATGCGTTCCTGGTGCATAACGCCCGTTCAAACATGAACAACC
ATGTCGGCTACAACCATCACCTTAGCGACATCCGCAATCTGGCGTTGGGAACGGACGGCATTGGTTCGGACATGTTTGAA
GAGATGAAATTTGCCTTCTTTAAACATCGCGATGCGGGTGGTCCGCTGTGGCCTGACAGTTTTGCCAAAGCCCTGACTAA
CGGTAACGAACTGATGAGCCGCAACTTTGGCGCGAAATTTGGGCTTCTGGAAGCCGGTTACAAAGCTGATTTAACCATTT
GCGATTACAACTCGCCGACGCCGCTGCTGGCAGACAATATCGCCGGGCATATCGCTTTCGGTATGGGCTCAGGCAGCGTT
CACAGCGTGATGGTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGC
CAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAA

Upstream 100 bases:

>100_bases
AGTTTAACAACGTACCACCGGAGCTGAACGATATGTGCCGCATCATCAGCCATGTCCACCAGCATCATCATTATCTGCTG
GGCCGCGTGGAGGTGTAATC

Downstream 100 bases:

>100_bases
ATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTCAGGCCCGACTCT
GTCGAACAGGCGCTGGAACT

Product: putative chlorohydrolase/aminohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPC
PDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRN
NGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHH
WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFE
EMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSV
HSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA

Sequences:

>Translated_442_residues
MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPC
PDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRN
NGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHH
WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFE
EMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSV
HSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA
>Mature_442_residues
MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPC
PDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRN
NGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHH
WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFE
EMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSV
HSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATZ/TRZ family

Homologues:

Organism=Escherichia coli, GI87082177, Length=442, Percent_Identity=100, Blast_Score=918, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSNA_ECOLI (Q46812)

Other databases:

- EMBL:   U28375
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   D21141
- PIR:   G65071
- RefSeq:   AP_003439.1
- RefSeq:   NP_417355.4
- ProteinModelPortal:   Q46812
- SMR:   Q46812
- DIP:   DIP-10923N
- STRING:   Q46812
- EnsemblBacteria:   EBESCT00000002115
- EnsemblBacteria:   EBESCT00000018030
- GeneID:   949072
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2847
- KEGG:   eco:b2879
- EchoBASE:   EB2874
- EcoGene:   EG13062
- eggNOG:   COG0402
- GeneTree:   EBGT00050000010509
- HOGENOM:   HBG668170
- OMA:   ETTDRNS
- ProtClustDB:   PRK07203
- BioCyc:   EcoCyc:G7498-MONOMER
- Genevestigator:   Q46812
- InterPro:   IPR006680
- InterPro:   IPR011059
- InterPro:   IPR017700
- TIGRFAMs:   TIGR03314

Pfam domain/function: PF01979 Amidohydro_1; SSF51338 Metalo_hydrolase

EC number: NA

Molecular weight: Translated: 48842; Mature: 48842

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVC
CEEECCCCEEEEEHHHHHCCCEEEEECCEEEEECHHHHHHCCCCCHHHHCCEEEECCEEE
SHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCT
CCCHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLI
HHHHCCCCCCEECCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHH
DEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHH
HHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCC
WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHH
CCCHHHHHHHHHHHCCCCCHHHHHCEEECCCCEEEEECCCEEEEECCHHCCCCCCCCCCH
LSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCC
GLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDC
CHHCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCEEEECCEEEEECCCCCCCH
DSIYAQARKAAASMWRRMDALA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVC
CEEECCCCEEEEEHHHHHCCCEEEEECCEEEEECHHHHHHCCCCCHHHHCCEEEECCEEE
SHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCT
CCCHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLI
HHHHCCCCCCEECCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHH
DEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHH
HHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCC
WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHH
CCCHHHHHHHHHHHCCCCCHHHHHCEEECCCCEEEEECCCEEEEECCHHCCCCCCCCCCH
LSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCC
GLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDC
CHHCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCEEEECCEEEEECCCCCCCH
DSIYAQARKAAASMWRRMDALA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7764507; 9278503; 10074077