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The map label for this gene is cse1 [H]

Identifier: 157162209

GI number: 157162209

Start: 2899863

End: 2901371

Strand: Reverse

Name: cse1 [H]

Synonym: EcHS_A2899

Alternate gene names: 157162209

Gene position: 2901371-2899863 (Counterclockwise)

Preceding gene: 157162210

Following gene: 157162208

Centisome position: 62.48

GC content: 44.14

Gene sequence:

>1509_bases
ATGAATTTGCTTATTGATAACTGGATCCCTGTACGCCCGCAAAGTGGGGGGAAAGTCCAAATCATAAATCTGCAATCGCT
ATTCTGCAGTAAAAATCAGTGGCGGTTAAGTTTGCCCCGTGACGATATGGAACTGGCCGCTTTAGCTCTGCTGGTTTGCA
TCGGGCAAATTATCGCCCCTGCAAAAGATGACGTTGAATTTCGGCATCGCATTATGAATCCGCTCAGTGAAGATGAGTTT
CAACGACTCATCGCGCCGTGGATAGATATGTTCTACCTTAATCACGCAGAACATCCCTTTATGCAGACCAAAGGTGTTAA
AGCAAATGATGTGACTCCAATGGAAAAACTGTTGGCTGGGGTAAGCGGCGCGACGAATTGTGCATTTGTCAATCAACCGG
GTCAGGGTGAAGCATTATGTGGTGGATGCACTGCGATTGCGTTATTCAACCAGGCGAATCAGGCACCTGGTTTTGGTGGT
GGCTTTAAAAGCGGTTTACGTGGAGGAACACCTATAACCACCTTCGTACGTGGGATCGATCTTCGCTCGACGGTGTTACT
CAATGTCCTCACAATACCTCGTCTCCAAAAACAATTTCCCAATGAATCACATACGGAAAACCAACCTACCTGGATTAAGC
CTGTCAAGCCCAATGAATCTGTGCCAGCTTCGTCAATTGGCTTTGTCCGTGGCTTATTCTGGCAACCAGCGCATATTGAA
TTATGCGATCCCATTGGGATTGGTAAATGTTCTTGCTGTGGACAGGAAAGCAATTTGCGTTATACCGGTTTTCTTAAGGA
AAAATTTACCTTTACAGTTAATGGGCTATGGCCCCATCCGCATTCCCCTTGTCTGGTAACAGTCAAGAAAGGGGAGGTTG
AGGAAAAATTTCTTGCTTTCACCACCTCCGCACCATCATGGACACAAATCAGCCGAGTTGTGGTAGATAAAATTATTCAA
AATGAAAATGGAAATCGCGTGGCGGCGGTTGTGAATCAATTCAGAAATATTGCGTCGCAAAGTCCTCTTGAATTGATTAT
GGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGCTGATGTTTAATCAGGGATGGCAACAAT
ACGGCAATGTGATAAACGAAATAGTGACTGTTGGTTTGGGATATAAAACAGCCTTACGCAAGGCGTTATATACCTTTGCA
GAAGGGTTTAAAAATAAAGACTTCAAAGGGGCCGGAGTCTCTGTTCATGAGACTGCAGAAAGGCATTTCTATCGCCAGAG
TGAATTATTAATTCTCGATGTACTGGCGAATATTAATTTTTCCCAGGCTGATGAGGTAATAGCTGATTTACGAGACAAAC
TTCATCAATTGTGTGAAATGCTATTTAATCAATCTGTAGCGCCCTATGCACATCATCCTAAATTAATAAGCACATTAGCG
CTTGCCCGCGCCACGCTATACAAACATTTACGGGAGTTAAAACCGCAAGGAGGGCCATCAAATGGCTGA

Upstream 100 bases:

>100_bases
AATTAATTACGCCGTATTTTTTCTTTGTTTTTACCGATAACGGAAGTGTGCCGACGTATAGAAATGCAGGAGAAATGTCG
GAGCATATGAAGGAGAACAA

Downstream 100 bases:

>100_bases
TGAAATTGATGCAATGGCTTTATATCGAGCCTGGCAACAACTGGATAATGGAGCATGTGCGCAAATTAGACGTGTTTCAG
AACCTGATGAATTACGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MNLLIDNWIPVRPQSGGKVQIINLQSLFCSKNQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLSEDEF
QRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGG
GFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQ
NENGNRVAAVVNQFRNIASQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFA
EGFKNKDFKGAGVSVHETAERHFYRQSELLILDVLANINFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
LARATLYKHLRELKPQGGPSNG

Sequences:

>Translated_502_residues
MNLLIDNWIPVRPQSGGKVQIINLQSLFCSKNQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLSEDEF
QRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGG
GFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQ
NENGNRVAAVVNQFRNIASQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFA
EGFKNKDFKGAGVSVHETAERHFYRQSELLILDVLANINFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
LARATLYKHLRELKPQGGPSNG
>Mature_502_residues
MNLLIDNWIPVRPQSGGKVQIINLQSLFCSKNQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLSEDEF
QRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGG
GFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQ
NENGNRVAAVVNQFRNIASQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFA
EGFKNKDFKGAGVSVHETAERHFYRQSELLILDVLANINFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
LARATLYKHLRELKPQGGPSNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789118, Length=502, Percent_Identity=97.0119521912351, Blast_Score=1023, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013381 [H]

Pfam domain/function: PF09481 CRISPR_Cse1 [H]

EC number: NA

Molecular weight: Translated: 55832; Mature: 55832

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLIDNWIPVRPQSGGKVQIINLQSLFCSKNQWRLSLPRDDMELAALALLVCIGQIIAP
CCEEECCEEECCCCCCCEEEEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCC
AKDDVEFRHRIMNPLSEDEFQRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHC
VSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVRGID
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHCCC
LRSTVLLNVLTIPRLQKQFPNESHTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAF
EECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHEEE
TTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIASQSPLELIMGGYRNNQASILER
ECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHH
RHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAE
HCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RHFYRQSELLILDVLANINFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
HHHHHHCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LARATLYKHLRELKPQGGPSNG
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNLLIDNWIPVRPQSGGKVQIINLQSLFCSKNQWRLSLPRDDMELAALALLVCIGQIIAP
CCEEECCEEECCCCCCCEEEEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCC
AKDDVEFRHRIMNPLSEDEFQRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHC
VSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVRGID
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHCCC
LRSTVLLNVLTIPRLQKQFPNESHTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAF
EECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHEEE
TTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIASQSPLELIMGGYRNNQASILER
ECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHH
RHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAE
HCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RHFYRQSELLILDVLANINFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
HHHHHHCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LARATLYKHLRELKPQGGPSNG
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]