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The map label for this gene is tuaB [H]

Identifier: 157161538

GI number: 157161538

Start: 2163469

End: 2164899

Strand: Reverse

Name: tuaB [H]

Synonym: EcHS_A2184

Alternate gene names: 157161538

Gene position: 2164899-2163469 (Counterclockwise)

Preceding gene: 157161539

Following gene: 157161537

Centisome position: 46.62

GC content: 33.05

Gene sequence:

>1431_bases
ATGACATTGCTTTCAAATGCTAAATGGAACATGGTATCACAATTTATCAAAATGTTAGTGCAACTAACAAACATAGTCTA
TTTAGCAAAAATTATTCCTCCAAGCGAATATGGTTTAATGGCTATGGCTCTTGTTGTTGTGAACTTAGGTATCCTGTTAC
GAGATTTAGGCACTTCTGCTGCATTAATACAAAGGAAAGATCTTACTGAGTCTCTAATTAATACTGTTTTTTGGTTAAAT
CTCCTCATGGGATTGACTTTATTTGTTCTGGTTTTTTCGGGCTCTAGTGTGATATCCAGTATCTATCATCAGCCGAAATT
AACTTTAGTATTGATGTTGCTTAGTTTTACATTTCCTCTTTCGAGCTGTGCGGCAGCTCACCTTGCTTTGCTTGAGAGGG
ACTCGAAATTCAAAACAGTCTCTAGGATAGAAATTTCTTCTTCACTTGCTTCATTAGTACTAGCGATTACTTTAGCAAAT
ATGGGCTTTGGTGTTTTCAGTCTTGTTGGTCAAGCTTTAATACTTAATCTGATGTCTGCTATACAATTCTGGCTTGCATC
AAATTGGAAACCTTCTATTAGGGTTTTTATTAATTATAAAGATTTGAAAAGTATTTTTAGTTTTAGTGCAAATTTATCAA
TGTTTAATTTTATAAATTATTTTTCAAGGAACGCAGATAGCTTTATTATTGGTAAATTCATGTCCGCTTCAATTCTCGGG
AGTTATAATCTTGCTTATAGAATTATGCTTTTCCCATTGCAAAGTCTTACCTTTGTCGCAACTAGGTCACTTTATCCAAT
ATTAAGTAAACAACAAAGTAATAATCAGCATATATCAAAAATATATTTAAAGTGTGTCTATGTTGTGTTGTTTATAACAT
GTCCATTGATGTCTGGACTGGCATTTTATAGTGAGCCTTTTATCCGATTGATATTCGGTGATGAATGGTATCTGACGGGA
ATAGTATTAAAATGGTTAGCGCCAACTGCAATAATACAAGCGGTACTTAGTACTTCTGGTTCAGTTTTTATGGCTAAAGG
TCGTACAGATATTTTATTAAAGCTTGGCATTATTGGAATGATCTTGCAAGTGGGAGCTTTCATCATAGGTGTTCAATATA
CAATAACCACATTTGCTATGTGTTATCTTCTTGCTAATGTTATTAATTTTTTCCCTGTCATGTGGTCTTTAATGGGTTTG
TTAGGGGAGAATCTCAATGTTTTTTTTAAAAAGAACTATTCAATTGTTTTGGCTACATTAGTCATGTTAAGTTACTTAAA
ACTCATTGATTATTTCTTTTTCCCCAATGCTATTGCGAGCCTTAATATTTTAGTTCTATTATCCTTTTCTGGCGCCGTTG
TTTATTTATTAGCCTCTCTCACTCTTTCCGCAACTCTTAGAAAATTTGTGCTATCAAAGATTAAAAAATGA

Upstream 100 bases:

>100_bases
CATCCCCGATGCCATTAATTTGATGCATTAACATCTCTCATACTAATCATAACTTCATAAACTCATATATCCTTAGTGCA
TACTCAAAGGCTCGCCTGAT

Downstream 100 bases:

>100_bases
CTGTCACTCACAACAGTTCATTTTTGATCCAACTATGATTTGGTTATGGTTTTTTTTTGTGATTCAATACTTTTTAAGTT
TAATGAAAGCTAATTACACA

Product: putative polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MTLLSNAKWNMVSQFIKMLVQLTNIVYLAKIIPPSEYGLMAMALVVVNLGILLRDLGTSAALIQRKDLTESLINTVFWLN
LLMGLTLFVLVFSGSSVISSIYHQPKLTLVLMLLSFTFPLSSCAAAHLALLERDSKFKTVSRIEISSSLASLVLAITLAN
MGFGVFSLVGQALILNLMSAIQFWLASNWKPSIRVFINYKDLKSIFSFSANLSMFNFINYFSRNADSFIIGKFMSASILG
SYNLAYRIMLFPLQSLTFVATRSLYPILSKQQSNNQHISKIYLKCVYVVLFITCPLMSGLAFYSEPFIRLIFGDEWYLTG
IVLKWLAPTAIIQAVLSTSGSVFMAKGRTDILLKLGIIGMILQVGAFIIGVQYTITTFAMCYLLANVINFFPVMWSLMGL
LGENLNVFFKKNYSIVLATLVMLSYLKLIDYFFFPNAIASLNILVLLSFSGAVVYLLASLTLSATLRKFVLSKIKK

Sequences:

>Translated_476_residues
MTLLSNAKWNMVSQFIKMLVQLTNIVYLAKIIPPSEYGLMAMALVVVNLGILLRDLGTSAALIQRKDLTESLINTVFWLN
LLMGLTLFVLVFSGSSVISSIYHQPKLTLVLMLLSFTFPLSSCAAAHLALLERDSKFKTVSRIEISSSLASLVLAITLAN
MGFGVFSLVGQALILNLMSAIQFWLASNWKPSIRVFINYKDLKSIFSFSANLSMFNFINYFSRNADSFIIGKFMSASILG
SYNLAYRIMLFPLQSLTFVATRSLYPILSKQQSNNQHISKIYLKCVYVVLFITCPLMSGLAFYSEPFIRLIFGDEWYLTG
IVLKWLAPTAIIQAVLSTSGSVFMAKGRTDILLKLGIIGMILQVGAFIIGVQYTITTFAMCYLLANVINFFPVMWSLMGL
LGENLNVFFKKNYSIVLATLVMLSYLKLIDYFFFPNAIASLNILVLLSFSGAVVYLLASLTLSATLRKFVLSKIKK
>Mature_475_residues
TLLSNAKWNMVSQFIKMLVQLTNIVYLAKIIPPSEYGLMAMALVVVNLGILLRDLGTSAALIQRKDLTESLINTVFWLNL
LMGLTLFVLVFSGSSVISSIYHQPKLTLVLMLLSFTFPLSSCAAAHLALLERDSKFKTVSRIEISSSLASLVLAITLANM
GFGVFSLVGQALILNLMSAIQFWLASNWKPSIRVFINYKDLKSIFSFSANLSMFNFINYFSRNADSFIIGKFMSASILGS
YNLAYRIMLFPLQSLTFVATRSLYPILSKQQSNNQHISKIYLKCVYVVLFITCPLMSGLAFYSEPFIRLIFGDEWYLTGI
VLKWLAPTAIIQAVLSTSGSVFMAKGRTDILLKLGIIGMILQVGAFIIGVQYTITTFAMCYLLANVINFFPVMWSLMGLL
GENLNVFFKKNYSIVLATLVMLSYLKLIDYFFFPNAIASLNILVLLSFSGAVVYLLASLTLSATLRKFVLSKIKK

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=394, Percent_Identity=27.6649746192893, Blast_Score=158, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 53088; Mature: 52956

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLSNAKWNMVSQFIKMLVQLTNIVYLAKIIPPSEYGLMAMALVVVNLGILLRDLGTSA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
ALIQRKDLTESLINTVFWLNLLMGLTLFVLVFSGSSVISSIYHQPKLTLVLMLLSFTFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCH
SSCAAAHLALLERDSKFKTVSRIEISSSLASLVLAITLANMGFGVFSLVGQALILNLMSA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IQFWLASNWKPSIRVFINYKDLKSIFSFSANLSMFNFINYFSRNADSFIIGKFMSASILG
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SYNLAYRIMLFPLQSLTFVATRSLYPILSKQQSNNQHISKIYLKCVYVVLFITCPLMSGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AFYSEPFIRLIFGDEWYLTGIVLKWLAPTAIIQAVLSTSGSVFMAKGRTDILLKLGIIGM
HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
ILQVGAFIIGVQYTITTFAMCYLLANVINFFPVMWSLMGLLGENLNVFFKKNYSIVLATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
VMLSYLKLIDYFFFPNAIASLNILVLLSFSGAVVYLLASLTLSATLRKFVLSKIKK
HHHHHHHHHHHHHCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLLSNAKWNMVSQFIKMLVQLTNIVYLAKIIPPSEYGLMAMALVVVNLGILLRDLGTSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
ALIQRKDLTESLINTVFWLNLLMGLTLFVLVFSGSSVISSIYHQPKLTLVLMLLSFTFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCH
SSCAAAHLALLERDSKFKTVSRIEISSSLASLVLAITLANMGFGVFSLVGQALILNLMSA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IQFWLASNWKPSIRVFINYKDLKSIFSFSANLSMFNFINYFSRNADSFIIGKFMSASILG
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SYNLAYRIMLFPLQSLTFVATRSLYPILSKQQSNNQHISKIYLKCVYVVLFITCPLMSGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AFYSEPFIRLIFGDEWYLTGIVLKWLAPTAIIQAVLSTSGSVFMAKGRTDILLKLGIIGM
HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
ILQVGAFIIGVQYTITTFAMCYLLANVINFFPVMWSLMGLLGENLNVFFKKNYSIVLATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
VMLSYLKLIDYFFFPNAIASLNILVLLSFSGAVVYLLASLTLSATLRKFVLSKIKK
HHHHHHHHHHHHHCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]