Click here to switch to the map view.

The map label for this gene is ymfQ [H]

Identifier: 157161450

GI number: 157161450

Start: 2069863

End: 2070537

Strand: Reverse

Name: ymfQ [H]

Synonym: EcHS_A2083

Alternate gene names: 157161450

Gene position: 2070537-2069863 (Counterclockwise)

Preceding gene: 157161451

Following gene: 157161449

Centisome position: 44.59

GC content: 50.81

Gene sequence:

>675_bases
ATGAGCCTTTTCTCAACAGACGATTATCAGAAGGCACTGCAGGCGCTTATCCCCACCGGCCGAGCGTGGACACGGGATCC
AAAAGCTGTTCAGGCCGCTGTACTGCGGGCCATTGCGGCCAGTTTCCAGCGAAGTGATAACGACGCACTTGCATTGCTGC
GCGGTGCCTTTCCAAAAACTGCGACGATTATGCTCACCGAGTGGGAAAAAACACTCGGCTTACCTGATGATTGCTCGATT
GGCGAAGTGGATACGATTGCGAAGCGTCAGTCTGACATTGTATCGAAACTCATCAGTACCGGCGGGCAGTCAAAGAGCTA
TTTCATCAGTATTGCCGCAGCAATGGGTTATACGATTTCGATTAAGGAATACCGGCAGGCGCGTGCTGGCTTATCGGTAT
GTGGTGACGGGCTAAATGGGGATGACTGGCCATTTGTCTGGCTGGTAGAGGCGGAAGACACAACGATAACTTATGCCCGT
GCAGGTCTGAGTTATTGTGGCGATCCATTACGTTCCTGGGGTAATCGTCAGCTTGAATGCCGGATTAATGCCCTCGCCCC
CTCATACACCCTGGTCAAATTCGGCTATATCTATTTCGGTTTTAACGATGAGGGGGTTTACGAAGTCACGCCTGAGTTTG
CCAAAATATTTGATATCGCTTCCGGTTACGTTTAA

Upstream 100 bases:

>100_bases
GGGATGTTGCCGGTACTTCAGGTTATATCCTTGTGTCGCCTTCTGCGAATATTGAGCCGGGAGTTGGGGAGCTGGCTGTT
CGTGGTGAGGTGAACTACAC

Downstream 100 bases:

>100_bases
TTCAGACATTTAAAAAGAAGGTTTATATGAGAAAAGTTGGCAGTACAACTGACACCGCTGATGCTAATGGTGAATACACT
AATGGTAATGTCGCTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSLFSTDDYQKALQALIPTGRAWTRDPKAVQAAVLRAIAASFQRSDNDALALLRGAFPKTATIMLTEWEKTLGLPDDCSI
GEVDTIAKRQSDIVSKLISTGGQSKSYFISIAAAMGYTISIKEYRQARAGLSVCGDGLNGDDWPFVWLVEAEDTTITYAR
AGLSYCGDPLRSWGNRQLECRINALAPSYTLVKFGYIYFGFNDEGVYEVTPEFAKIFDIASGYV

Sequences:

>Translated_224_residues
MSLFSTDDYQKALQALIPTGRAWTRDPKAVQAAVLRAIAASFQRSDNDALALLRGAFPKTATIMLTEWEKTLGLPDDCSI
GEVDTIAKRQSDIVSKLISTGGQSKSYFISIAAAMGYTISIKEYRQARAGLSVCGDGLNGDDWPFVWLVEAEDTTITYAR
AGLSYCGDPLRSWGNRQLECRINALAPSYTLVKFGYIYFGFNDEGVYEVTPEFAKIFDIASGYV
>Mature_223_residues
SLFSTDDYQKALQALIPTGRAWTRDPKAVQAAVLRAIAASFQRSDNDALALLRGAFPKTATIMLTEWEKTLGLPDDCSIG
EVDTIAKRQSDIVSKLISTGGQSKSYFISIAAAMGYTISIKEYRQARAGLSVCGDGLNGDDWPFVWLVEAEDTTITYARA
GLSYCGDPLRSWGNRQLECRINALAPSYTLVKFGYIYFGFNDEGVYEVTPEFAKIFDIASGYV

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 and H.influenzae HI_1521 [H]

Homologues:

Organism=Escherichia coli, GI1787399, Length=199, Percent_Identity=33.1658291457286, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 24606; Mature: 24475

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSTDDYQKALQALIPTGRAWTRDPKAVQAAVLRAIAASFQRSDNDALALLRGAFPKT
CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
ATIMLTEWEKTLGLPDDCSIGEVDTIAKRQSDIVSKLISTGGQSKSYFISIAAAMGYTIS
EEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHCCEEE
IKEYRQARAGLSVCGDGLNGDDWPFVWLVEAEDTTITYARAGLSYCGDPLRSWGNRQLEC
HHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCEEEEHHHCHHHCCHHHHHHCCCEEEE
RINALAPSYTLVKFGYIYFGFNDEGVYEVTPEFAKIFDIASGYV
EEEECCCCEEEEEEEEEEEEECCCCCEEECHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLFSTDDYQKALQALIPTGRAWTRDPKAVQAAVLRAIAASFQRSDNDALALLRGAFPKT
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
ATIMLTEWEKTLGLPDDCSIGEVDTIAKRQSDIVSKLISTGGQSKSYFISIAAAMGYTIS
EEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHCCEEE
IKEYRQARAGLSVCGDGLNGDDWPFVWLVEAEDTTITYARAGLSYCGDPLRSWGNRQLEC
HHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCEEEEHHHCHHHCCHHHHHHCCCEEEE
RINALAPSYTLVKFGYIYFGFNDEGVYEVTPEFAKIFDIASGYV
EEEECCCCEEEEEEEEEEEEECCCCCEEECHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]