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The map label for this gene is yadC [H]

Identifier: 157159603

GI number: 157159603

Start: 151197

End: 152471

Strand: Reverse

Name: yadC [H]

Synonym: EcHS_A0139

Alternate gene names: 157159603

Gene position: 152471-151197 (Counterclockwise)

Preceding gene: 157159604

Following gene: 157159602

Centisome position: 3.28

GC content: 39.22

Gene sequence:

>1275_bases
ATGAAGAAATTCTTCAGACATTTTCTTTTTTTAATTCTGTGCTTGAGTTGTTATACCGCGAGTGCTGGCACTGATGATAA
CGTAGGATATATTGTTGGGAATAGTTACGGCGTTGGTCCGTCAGATCAAAAATGGAGAGAAACGGGGCCGAATGGCGATG
CTACTGTCATATTCAGATATGCAACAAGTACAAATAATTTAGTTTTCTACAAACCGACGCAGCTTGGACCTACAGGTGTA
AAATTACAGTGGAGTCAGTTAGATACCGCTTCTGGTGGTGGTTTTCTTTATTGCAACAGAAGTGATAGCACAAGTGGTAG
CGCAATGCGTATTGAAAATGCAATGGTTGACTCAGGTAAAATGTATGGCTCCCATAAATTATTTAATACATCAGTTCCTG
GTTTGTATTACACATTATTAATTTCAAACATGTGGTCAGCTTACGGTACCGTAACTAACGTTAGTTCACCTGGGATATAC
ATTGGTGACTCTGCAGAACAATATTTTTCGTGGTATAATCCAAGCGAAGACGTGTTATATTGGAGTTGCAATAATGCGAA
TAGCACCCGTAAATACTGGGCTGTAGGTGGTATTTATCAGACCCTTACAATTGAATTCTATACAGATACAAACTTTGATC
CAACAGTAACTCAACAGATCAAATTATCCAGCTCATCAAATTATCTGTATTCATTTAAAGCCTATGGCGCAGGCCAAGGT
ATAAATGAGCATAGTTATTTTATCAAAATCGATTTCGATCTGCTCAATGTCAAGTTGACTAATCCCACTTGTTTTACCGC
TATGCTTAGTGGAACTTCTGTGACTGGTTCTACGGTAAAAATGGGTGAATATAGTGCAGAACAAATCAGAAACGGTGCCA
CACCGGTTCCTTTTGATATTTCACTTCAAAACTGCGTTCGTGTGACTAATATTGAGACAAAATTAGTTTCAACAAAGGTT
GGTACTGAAAACGGGCAACTCCTTGGTAATACTCTCACAGGTAATGACGCAGCAAAAGGAGTCGGTGTACTCATAGAAGG
TTTAGCAACTAGTAAAAATCCTCTAATGACATTGAAACCTAATGATTCAAATTCTGTTTATAAAGATTACGACCCGAGAG
GCAAAGACGATACAACAGGAGGAGTTTACCCGGATCAAGATACAGGTATAACATACCCTCTCCATTTCCAGGCCACGCTA
CAACAGGATGGAACTATACCAATAGAAGCTGGTGAGTTTAAAGCCACCAGTACTTTCCAGGTAACCTACCCTTAA

Upstream 100 bases:

>100_bases
TCTGGCCAGGTAATGAGTCATATATTAGTTGATGTGTACTACGAATAATAGATCAAAACAAATAACTGCGACTGTTACAG
CAGTAGATGGTGGAGTGATA

Downstream 100 bases:

>100_bases
TAAGTCCACCGCACCGCCATCATCTGGCGGTGCGGTAATTGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCC
AGGCAACACGACATCATTTA

Product: putative fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKKFFRHFLFLILCLSCYTASAGTDDNVGYIVGNSYGVGPSDQKWRETGPNGDATVIFRYATSTNNLVFYKPTQLGPTGV
KLQWSQLDTASGGGFLYCNRSDSTSGSAMRIENAMVDSGKMYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIY
IGDSAEQYFSWYNPSEDVLYWSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQQIKLSSSSNYLYSFKAYGAGQG
INEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTGSTVKMGEYSAEQIRNGATPVPFDISLQNCVRVTNIETKLVSTKV
GTENGQLLGNTLTGNDAAKGVGVLIEGLATSKNPLMTLKPNDSNSVYKDYDPRGKDDTTGGVYPDQDTGITYPLHFQATL
QQDGTIPIEAGEFKATSTFQVTYP

Sequences:

>Translated_424_residues
MKKFFRHFLFLILCLSCYTASAGTDDNVGYIVGNSYGVGPSDQKWRETGPNGDATVIFRYATSTNNLVFYKPTQLGPTGV
KLQWSQLDTASGGGFLYCNRSDSTSGSAMRIENAMVDSGKMYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIY
IGDSAEQYFSWYNPSEDVLYWSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQQIKLSSSSNYLYSFKAYGAGQG
INEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTGSTVKMGEYSAEQIRNGATPVPFDISLQNCVRVTNIETKLVSTKV
GTENGQLLGNTLTGNDAAKGVGVLIEGLATSKNPLMTLKPNDSNSVYKDYDPRGKDDTTGGVYPDQDTGITYPLHFQATL
QQDGTIPIEAGEFKATSTFQVTYP
>Mature_424_residues
MKKFFRHFLFLILCLSCYTASAGTDDNVGYIVGNSYGVGPSDQKWRETGPNGDATVIFRYATSTNNLVFYKPTQLGPTGV
KLQWSQLDTASGGGFLYCNRSDSTSGSAMRIENAMVDSGKMYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIY
IGDSAEQYFSWYNPSEDVLYWSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQQIKLSSSSNYLYSFKAYGAGQG
INEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTGSTVKMGEYSAEQIRNGATPVPFDISLQNCVRVTNIETKLVSTKV
GTENGQLLGNTLTGNDAAKGVGVLIEGLATSKNPLMTLKPNDSNSVYKDYDPRGKDDTTGGVYPDQDTGITYPLHFQATL
QQDGTIPIEAGEFKATSTFQVTYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786328, Length=424, Percent_Identity=64.1509433962264, Blast_Score=508, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- InterPro:   IPR017014 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 46409; Mature: 46409

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFRHFLFLILCLSCYTASAGTDDNVGYIVGNSYGVGPSDQKWRETGPNGDATVIFRY
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEE
ATSTNNLVFYKPTQLGPTGVKLQWSQLDTASGGGFLYCNRSDSTSGSAMRIENAMVDSGK
ECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCC
MYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIYIGDSAEQYFSWYNPSEDVLY
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCEEECCCCCEEECCCHHHHHCCCCCCCCEEE
WSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQQIKLSSSSNYLYSFKAYGAGQG
EEECCCCCCEEEEEECCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
INEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTGSTVKMGEYSAEQIRNGATPVPFDI
CCCCEEEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEECCCCHHHHHCCCCCCEEEC
SLQNCVRVTNIETKLVSTKVGTENGQLLGNTLTGNDAAKGVGVLIEGLATSKNPLMTLKP
CHHHEEEEECCEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEECC
NDSNSVYKDYDPRGKDDTTGGVYPDQDTGITYPLHFQATLQQDGTIPIEAGEFKATSTFQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCEECCEEEE
VTYP
EECC
>Mature Secondary Structure
MKKFFRHFLFLILCLSCYTASAGTDDNVGYIVGNSYGVGPSDQKWRETGPNGDATVIFRY
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEE
ATSTNNLVFYKPTQLGPTGVKLQWSQLDTASGGGFLYCNRSDSTSGSAMRIENAMVDSGK
ECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCC
MYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIYIGDSAEQYFSWYNPSEDVLY
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCEEECCCCCEEECCCHHHHHCCCCCCCCEEE
WSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQQIKLSSSSNYLYSFKAYGAGQG
EEECCCCCCEEEEEECCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
INEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTGSTVKMGEYSAEQIRNGATPVPFDI
CCCCEEEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEECCCCHHHHHCCCCCCEEEC
SLQNCVRVTNIETKLVSTKVGTENGQLLGNTLTGNDAAKGVGVLIEGLATSKNPLMTLKP
CHHHEEEEECCEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEECC
NDSNSVYKDYDPRGKDDTTGGVYPDQDTGITYPLHFQATLQQDGTIPIEAGEFKATSTFQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCEECCEEEE
VTYP
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 8096212 [H]