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The map label for this gene is yadE [H]

Identifier: 157159598

GI number: 157159598

Start: 146565

End: 147794

Strand: Direct

Name: yadE [H]

Synonym: EcHS_A0134

Alternate gene names: 157159598

Gene position: 146565-147794 (Clockwise)

Preceding gene: 157159597

Following gene: 157159600

Centisome position: 3.16

GC content: 49.84

Gene sequence:

>1230_bases
ATGTACAAACAAGCTGTTATTCTCCTGCTGATGCTGTTTACCGCAAGTGTCAGTGCCGCGTTACCTGCCCGTTATATGCA
AACCATCGAAAATGCTGCGGTCTGGGCGCAAATTGGTGACAAGATGGTGACCGTGGGGAATATTCGGGCCGGACAAATCA
TTGCCGTGGAGCCCACTGCCGCAAGTTATTACGCATTTAATTTTGGCTTTGGCAAAGGGTTTATCGATAAAGGTCATCTC
GAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGTGACCTCAACAAGCCGCTGAGTCATCAGAACTTAGTTAC
CTGGAAAGATACGCCGGTTTATAACGCGCCGAGTGCGGGCAGTGCGCCATTTGGGGTACTGGTGGACAATTTGCGCTACC
CGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGACTGGCCTATATCAGC
GCGCTGGATGCCCAACCCGATAATGGCCTGCCGGTGCTAACCTATCACCATATTCTGCGCGATGAAGAAAACACCCGTTT
TCGCCATACTTCGACGACCACCTCGGTACGCGCTTTCAATAACCAGATGGCCTGGCTGCGCGACAGGGGATACGCGACAC
TGAGCATGGCGCAGCTGGAAGGTTACGTGAAGAATAAGATCAATCTCCCTGCGCGAGCGGTGGTGATTACCTTTGATGAT
GGCCTCAAGTCGGTGAGCCGCTATGCGTATCCTGTATTGAAACAATATGGCATGAAGGCGACGGCGTTTGTTGTTACCTC
GCGCATCAAACGTCACCCGCAGAAGTGGAACCCAAAATCGCTGCAATTTATGAGCGTTTCTGAGCTTAACGAAATTCGCG
ATGTTTTTGATTTTCAGTCACATACCCATTTTTTGCATCGGGTGGATGGCTATCGCCGACCCATATTACTGAGCCGTAGT
GAGCACAATATTCTGTTTGATTTTGCACGTTCACGCCGCGCTCTGGCGCAATTTAATCCGCATGTCTGGTATCTTTCGTA
TCCGTTTGGCGGATTTAATGACAAAGCCGTGAAGGCAGCAAACGATGCCGGATTTCACCTGGCGGTGACAACCATGAAAG
GCAAAGTAAAACCGGGGGATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCG
CGGCTGGTGAGTAACCAGCCGCAGGGATAA

Upstream 100 bases:

>100_bases
GCCTTTCGTCCTCAAACATAATTTGTATGAGTATTAACCCGCGATTCTGATGGCGCTTTTGCTACAATAAAAGCGTTGTT
TCACCCTCGGTTATTTTTTC

Downstream 100 bases:

>100_bases
CAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCTTCAAAATAGGCGACATTGGGTC
GCCAGGTGCGAGCTTCTTCA

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSHQNLVTWKDTPVYNAPSAGSAPFGVLVDNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMS
RLVSNQPQG

Sequences:

>Translated_409_residues
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSHQNLVTWKDTPVYNAPSAGSAPFGVLVDNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMS
RLVSNQPQG
>Mature_409_residues
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSHQNLVTWKDTPVYNAPSAGSAPFGVLVDNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMS
RLVSNQPQG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=409, Percent_Identity=98.5330073349633, Blast_Score=837, Evalue=0.0,
Organism=Escherichia coli, GI1787260, Length=245, Percent_Identity=25.3061224489796, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 46349; Mature: 46349

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCC
ASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSHQNLVTWKDTPVYNAPSAG
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
SAPFGVLVDNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR
CCCHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCEEEEEEEECCCCCCCCEEEEEHHHHC
DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
CCCCCEEEECCCCHHHHHHCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEECC
GLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
HTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAA
HHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEC
NDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQPQG
CCCCEEEEEEEEECCCCCCCCHHHEEEEHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCC
ASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSHQNLVTWKDTPVYNAPSAG
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
SAPFGVLVDNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR
CCCHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCEEEEEEEECCCCCCCCEEEEEHHHHC
DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
CCCCCEEEECCCCHHHHHHCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEECC
GLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
HTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAA
HHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEC
NDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQPQG
CCCCEEEEEEEEECCCCCCCCHHHEEEEHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]