Definition Escherichia coli E24377A, complete genome.
Accession NC_009801
Length 4,979,619

Click here to switch to the map view.

The map label for this gene is insC1 [C]

Identifier: 157159377

GI number: 157159377

Start: 4870390

End: 4871067

Strand: Reverse

Name: insC1 [C]

Synonym: EcE24377A_4881

Alternate gene names: 157159377

Gene position: 4871067-4870390 (Counterclockwise)

Preceding gene: 157157437

Following gene: 157159040

Centisome position: 97.82

GC content: 52.95

Gene sequence:

>678_bases
ATGTCCATCATTTTTAATGGACACTATCGTATGAAACACCGGACCTGGATCACTGAAGCTTTACGTCTTCACTTTGAAGA
ACATTTACCCCGGGTTGTGGCCGGGCGTCGCCTGGGTGTACCAAAATCAACAGTTTGTAGTATGTTCGTGCGCTTTCGGA
GAGCTGGCCTTTCGTGGCCTTTGCCCGCAGGCATGTCGGAGCAGGAACTTGATGCCTGCCTTTACGGACAATTTTCCACG
ATACCAGTCGTACGTCCTGAAAGCACCGTTATATCCGAAGCCCCCGTGGTAAAAAAACGTCCCCGGCGGCCCAACTTCCC
TTATGAGTTTAAAATCGCCTTAGTGGAGCAGTCACTGCAGCCCGGAGCCTGTGTGGCGCAGATCGCCCGGGAAAACGGAA
TCAACGATAACCTGCTCTTCAACTGGCGCCATCAATACCGGAAAGGTGGCCTGCTGCCTTCCGGAAAAAATATGCCGGCA
CTGCTTCCCGTGACGTTAACGCCGGAGCCGGATAATAAAATCCCGGCCCCCGCACAGGAACCAGAGCAGATAAATACACC
GTCCGACAGTCTGTGTTGTGAGCTGGTTCTGCCGGCCGGAACTCTCAGGCTTAAAGGTAAACTGACGCCGGCGTTATTAC
AGACACTTATCCGCGAAATAAAAGGGAGCAGCCACTGA

Upstream 100 bases:

>100_bases
CCGCTTCAATGGCAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACGTAACCGGCTCATTTAAACCGTCTGGTCTGTTT
CCTCCGGCTCTACAAAAATA

Downstream 100 bases:

>100_bases
TGATATCTCTCCCTGCAGGTTCGCGTATCTGGCTGGTTGCAGGTATCACCGATATGCGAAATGGCTTTAACGGCCTGGCA
TCAAAAGTTCAGAACGTCCT

Product: IS66 family orf1

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSIIFNGHYRMKHRTWITEALRLHFEEHLPRVVAGRRLGVPKSTVCSMFVRFRRAGLSWPLPAGMSEQELDACLYGQFST
IPVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPA
LLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSSH

Sequences:

>Translated_225_residues
MSIIFNGHYRMKHRTWITEALRLHFEEHLPRVVAGRRLGVPKSTVCSMFVRFRRAGLSWPLPAGMSEQELDACLYGQFST
IPVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPA
LLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSSH
>Mature_224_residues
SIIFNGHYRMKHRTWITEALRLHFEEHLPRVVAGRRLGVPKSTVCSMFVRFRRAGLSWPLPAGMSEQELDACLYGQFSTI
PVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPAL
LPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSSH

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25221; Mature: 25090

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIFNGHYRMKHRTWITEALRLHFEEHLPRVVAGRRLGVPKSTVCSMFVRFRRAGLSWP
CEEEECCCEEEHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
LPAGMSEQELDACLYGQFSTIPVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQ
CCCCCCHHHHHHHHCCCCCCCEEECCCCCHHCCCCCHHCCCCCCCCCEEEEEEEEECCCC
PGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQE
CCHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
PEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSSH
CCCCCCCCHHHEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIIFNGHYRMKHRTWITEALRLHFEEHLPRVVAGRRLGVPKSTVCSMFVRFRRAGLSWP
EEEECCCEEEHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
LPAGMSEQELDACLYGQFSTIPVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQ
CCCCCCHHHHHHHHCCCCCCCEEECCCCCHHCCCCCHHCCCCCCCCCEEEEEEEEECCCC
PGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQE
CCHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
PEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSSH
CCCCCCCCHHHEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA