| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is phnJ [H]
Identifier: 157158826
GI number: 157158826
Start: 4650647
End: 4651492
Strand: Reverse
Name: phnJ [H]
Synonym: EcE24377A_4652
Alternate gene names: 157158826
Gene position: 4651492-4650647 (Counterclockwise)
Preceding gene: 157155144
Following gene: 157155315
Centisome position: 93.41
GC content: 57.68
Gene sequence:
>846_bases ATGGCTAATCTGAGCGGCTACAACTTTGCCTACCTCGACGAGCAGACCAAACGCATGATCCGCCGCGCTATCTTAAAAGC GGTGGCGATCCCCGGTTATCAGGTGCCGTTTGGCGGGCGCGAGATGCCGATGCCATACGGCTGGGGAACCGGCGGCATAC AGCTCACCGCCAGCGTGATTGGCGAAAGCGACGTGCTGAAGGTGATTGACCAGGGTGCGGATGACACCACCAACGCCGTG TCGATTCGCAACTTCTTTAAGCGCGTGACCGGGGTAAACACCACTGAACGTACGGACGATGCGACGCTTATCCAGACGCG TCACCGCATCCCCGAAACGCCGCTGACCGAAGATCAGATCATTATCTTCCAGGTGCCAATCCCGGAACCGCTGCGCTTTA TCGAGCCGCGCGAAACGGAAACCCGCACCATGCACGCGCTGGAAGAGTACGGCGTGATGCAGGTGAAACTGTATGAAGAT ATCGCCCGCTTCGGTCATATCGCCACTACCTACGCCTATCCGGTGAAGGTGAACGGGCGCTACGTAATGGACCCGTCGCC GATCCCGAAATTCGATAACCCAAAAATGGACATGATGCCCGCCCTGCAACTGTTCGGCGCGGGGCGCGAGAAGCGCATCT ATGCGGTGCCGCCGTTTACCCGCGTGGAAAGTCTCGATTTCGACGATCACCCGTTCACCGTTCAGCAGTGGGATGAGCCA TGCGCCATCTGCGGATCGACCCACAGCTATCTTGATGAAGTGGTGCTGGATGACGCTGGAAACCGCATGTTTGTCTGCTC CGATACCGATTATTGCCGCCAACAGAGCGAGGCAAAAAACCAATGA
Upstream 100 bases:
>100_bases GTCGAAGCCGCAGGCTTTGTCTCGCACCTCAAACTCCCCCACTACGTCGATTTCCAGGCCGAACTGGAGCTACTCAAACG TCTGCAACAGGAGAAGAACC
Downstream 100 bases:
>100_bases ATCAACCGTTACTTTCGGTCAATAACCTGACCCACCTTTACGCGCCGGGCAAAGGCTTTAGCGATGTCTCTTTTGATTTA TGGCCGGGGGAAGTGCTGGG
Product: phosphonate metabolism protein PhnJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAV SIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ
Sequences:
>Translated_281_residues MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAV SIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ >Mature_280_residues ANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVS IRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDI ARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPC AICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3627
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnJ family [H]
Homologues:
Organism=Escherichia coli, GI1790536, Length=281, Percent_Identity=99.644128113879, Blast_Score=586, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010306 [H]
Pfam domain/function: PF06007 PhnJ [H]
EC number: NA
Molecular weight: Translated: 31860; Mature: 31728
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEEEHH GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQI CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE IIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR EEEECCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHEEEEEEEECCE YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP EEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCCCHHCCCCC CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ HHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCC >Mature Secondary Structure ANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI CCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEEEHH GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQI CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE IIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR EEEECCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHEEEEEEEECCE YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP EEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCCCHHCCCCC CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ HHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]