| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is yfcJ [C]
Identifier: 157157524
GI number: 157157524
Start: 2609394
End: 2610572
Strand: Reverse
Name: yfcJ [C]
Synonym: EcE24377A_2616
Alternate gene names: 157157524
Gene position: 2610572-2609394 (Counterclockwise)
Preceding gene: 157156872
Following gene: 157159447
Centisome position: 52.43
GC content: 52.25
Gene sequence:
>1179_bases ATGACCGCAGTTAGCCAAACCCAAAAAGCACCTTCAGCGAATGTTTCTCTTTTTCGTATCGCCTTCGCGGTTTTCCTCAC TTATATGACCGTCGGTCTGCCGTTACCGGTTATTCCCCTTTTTGTCCATCATGAACTGGGCTACGGCAATACCATGGTCG GGATTGCTGTCGGTGTGCAGTTTCTGGCAACAGTGTTGACGCGCGGATATGCCGGAAAACTTGCTGATCAGTTTGGCGCA AAGCGCTCTGCCCTGCAGGGAATGCTGGCATGTGGTCTGGCTGGCGCTTTCTGGTTACTGGCGGCACTAATGCCCGTCTC TGCACCTGCAAAATTCGCTTTGTTAGTTATTGGGCGATTAATTCTTGGTTTTGGCGAAAGCCAGTTGCTGACGGGAACCT TGTCCTGGGGAGTAGGTCTGGTAGGTCCGACTCGTTCAGGGAAGGTCATGTCATGGAACGGGATGGCAATTTATGGCGCA CTTGCTGCCGGTGCGCCGTTGGGATTATTGATTCATAGCCATTTTGGTTTTGCGGTGCTGGCAGTGATGACGATGATTTT ACCGCTGCTGGCCTGGGCATTTAATGGCAGCGTCCGTAAAGTTCCGCCACAAACAGGGGAGCGCCCGTCACTATGGAGTG TGGTCGGGTTAATCTGGAAACCAGGTATTGGACTGGCGCTGCAGGGCGTCGGTTTTGCTGTGATTGGCACGTTTATCTCC CTTTACTTTGCCAATAATGGTTGGCCAATGGCTGGTTTTACATTAACAGCCTTTGGTGGTGCCTTTGTTTTAATGCGCGT GCTGTTTGGCTGGATGCCGGATCGTTTTGGTGGCGTAAAAGTCGCAATAGCTTCTTTAGCTGTGGAAACCATTGGCTTAA TTCTGCTATGGCAGGCGCCAGGAGTATGGATTGCACAGGCAGGCGCTGCATTAACAGGTGCTGGTTGTTCGTTAATTTTC CCGGCACTTGGTGTGGAAGTAGTAAAACGTGTTCCGGCGCAGGTGCGTGGTACAGCACTGGGCGGCTACGCCGCTTTTCA GGATATCTCCTACGGTATAACGGGGCCGCTGGCAGGAATGCTGGCGACCTCATTTGGCTACCCGTCGGTTTTTCTTGCCG GGGCGATATCTGCGGTTGTAGGAATAGTGGTTACGCTGATCTCTTTTCGGCGTGGTTAA
Upstream 100 bases:
>100_bases TAATACGTACGCGTTAAATCCTGCCAACGCAGCGTAATCCTCAAAGTCAGGCAGAGAAGCGTGGATCCACCTCGCCTTGC TCTGCATTCTGGAGTAGAGC
Downstream 100 bases:
>100_bases ATCACCAGCCAGATAAGCAGGAGCACAATTAAGAACGCCATTAAAACCAACCCGGTACTCCCGGTGAAGGATTTAAACGT ATCCATCAGCGGAGGGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTAVSQTQKAPSANVSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGVQFLATVLTRGYAGKLADQFGA KRSALQGMLACGLAGAFWLLAALMPVSAPAKFALLVIGRLILGFGESQLLTGTLSWGVGLVGPTRSGKVMSWNGMAIYGA LAAGAPLGLLIHSHFGFAVLAVMTMILPLLAWAFNGSVRKVPPQTGERPSLWSVVGLIWKPGIGLALQGVGFAVIGTFIS LYFANNGWPMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIASLAVETIGLILLWQAPGVWIAQAGAALTGAGCSLIF PALGVEVVKRVPAQVRGTALGGYAAFQDISYGITGPLAGMLATSFGYPSVFLAGAISAVVGIVVTLISFRRG
Sequences:
>Translated_392_residues MTAVSQTQKAPSANVSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGVQFLATVLTRGYAGKLADQFGA KRSALQGMLACGLAGAFWLLAALMPVSAPAKFALLVIGRLILGFGESQLLTGTLSWGVGLVGPTRSGKVMSWNGMAIYGA LAAGAPLGLLIHSHFGFAVLAVMTMILPLLAWAFNGSVRKVPPQTGERPSLWSVVGLIWKPGIGLALQGVGFAVIGTFIS LYFANNGWPMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIASLAVETIGLILLWQAPGVWIAQAGAALTGAGCSLIF PALGVEVVKRVPAQVRGTALGGYAAFQDISYGITGPLAGMLATSFGYPSVFLAGAISAVVGIVVTLISFRRG >Mature_391_residues TAVSQTQKAPSANVSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGVQFLATVLTRGYAGKLADQFGAK RSALQGMLACGLAGAFWLLAALMPVSAPAKFALLVIGRLILGFGESQLLTGTLSWGVGLVGPTRSGKVMSWNGMAIYGAL AAGAPLGLLIHSHFGFAVLAVMTMILPLLAWAFNGSVRKVPPQTGERPSLWSVVGLIWKPGIGLALQGVGFAVIGTFISL YFANNGWPMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIASLAVETIGLILLWQAPGVWIAQAGAALTGAGCSLIFP ALGVEVVKRVPAQVRGTALGGYAAFQDISYGITGPLAGMLATSFGYPSVFLAGAISAVVGIVVTLISFRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0226 family [H]
Homologues:
Organism=Escherichia coli, GI1788662, Length=392, Percent_Identity=85.2040816326531, Blast_Score=620, Evalue=1e-179, Organism=Escherichia coli, GI87082270, Length=362, Percent_Identity=41.9889502762431, Blast_Score=251, Evalue=6e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR023008 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40649; Mature: 40518
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVSQTQKAPSANVSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGVQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH FLATVLTRGYAGKLADQFGAKRSALQGMLACGLAGAFWLLAALMPVSAPAKFALLVIGRL HHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ILGFGESQLLTGTLSWGVGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAVL HHCCCCCCEEEEEHHCCCEECCCCCCCCEEEECCEEEEHHHHCCCCHHHHHHHHHHHHHH AVMTMILPLLAWAFNGSVRKVPPQTGERPSLWSVVGLIWKPGIGLALQGVGFAVIGTFIS HHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHH LYFANNGWPMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIASLAVETIGLILLWQAP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCC GVWIAQAGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGITGPLAGM CCEEECCCCCEECCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCCHHHHHH LATSFGYPSVFLAGAISAVVGIVVTLISFRRG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAVSQTQKAPSANVSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGVQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH FLATVLTRGYAGKLADQFGAKRSALQGMLACGLAGAFWLLAALMPVSAPAKFALLVIGRL HHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ILGFGESQLLTGTLSWGVGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAVL HHCCCCCCEEEEEHHCCCEECCCCCCCCEEEECCEEEEHHHHCCCCHHHHHHHHHHHHHH AVMTMILPLLAWAFNGSVRKVPPQTGERPSLWSVVGLIWKPGIGLALQGVGFAVIGTFIS HHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHH LYFANNGWPMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIASLAVETIGLILLWQAP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCC GVWIAQAGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGITGPLAGM CCEEECCCCCEECCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCCHHHHHH LATSFGYPSVFLAGAISAVVGIVVTLISFRRG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA