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The map label for this gene is ycgV [H]

Identifier: 157157255

GI number: 157157255

Start: 1343767

End: 1346652

Strand: Reverse

Name: ycgV [H]

Synonym: EcE24377A_1348

Alternate gene names: 157157255

Gene position: 1346652-1343767 (Counterclockwise)

Preceding gene: 157157840

Following gene: 157158476

Centisome position: 27.04

GC content: 49.65

Gene sequence:

>2886_bases
ATGGGCATCAAACAACACAATGGGAATACCAAAGCAGATCGTCTCGCTGAATTAAAAATCCGTTCGCCCTCAATTCAACT
GATAAAATTTGGCGCTATTGGTTTGAATGCAATTATCTTTTCCCCCCTGCTGATAGCTGCTGATACAGGAAGTCAATATG
GCACCAATATTACTATTAATGAAGGTGACAGAATTACAGGAGATACCGCCGATCCATCAGGAAACCTCTATGGTGTAATG
ACCCCAGCAGGAAACACGCCTGGCAATATCAACCTGGGTAATGATGTCACCGTCAATGTCAACGACGCCTCTGGATATGC
AAAAGGAATCATTATTCAGGGCAAAAACAGCTCCCTGACAGCTAACCGACTCACAGTAGATGTTGTTGGTCAAACCTCTG
CCATCGGCATTAACTTAATTGGTGACTATACCCATGCTGACTTAGGCACAGGCAGCACCATTAAGAGTAACGATGACGGC
ATCATTATTGGGCATAGCTCAACACTAACAGCCACTCAATTCACCATTGAAAACTCGAACGGTATAGGCCTAACCATCAA
TGACTATGGCACCAGTGTCGATCTTGGAAGCGGAAGTAAAATCACGACCGATGGAAGTACAGGTGTTTATATCGGTGGTC
TCAACGGCAATAACGCCAATGGTGCTGCGCGTTTTACGGCTACAGACCTGACAATCGATGTTCAGGGCTACAGCGCCATG
GGGATAAACGTACAGAAAAACTCTGTTGTCGATCTCGGAACAAACAGTTCCATTAAAACCAATGGCGATAATGCACACGG
CCTCTGGAGCTTTGGCCAGGTTAGCGCGAATGCACTCACTGTTGATGTAACTGGAGCCGCGGCCAATGGCGTCGAAGTTC
GTGGTGGTACAACCACTATCGGTGCAGATAGCCATATTTCTTCCGCGCAGGGCGGTGGCCTCGTCACCAGTGGTTCAGAC
GCGACAATCAATTTTTCTGGCACGGCGGCGCAACGAAACAGCATCTTTTCCGGCGGTTCTTATGGTGCCTCGGCCCAGAC
GGCAACGGCTGTTGTCAACATGCAAAATACCGATATTACAGTTGATCGTAATGGCAGTCTGGCGCTGGGTTTGTGGGCGC
TCAGCGGCGGTAGAATAACCGGAGACAGTTTGGCTATCACCGGCGCGGCAGGAGCCAGGGGAATTTATGCCATGACCAAC
AGCCAGATCGACCTCACGAGCGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATTGCAACGCAACATGACGA
TGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTGGGCTAATCA
ATTTAGATATGCACCCAGGGTCGGTTTGGACAGGTTCCTCCCTCAGCGATAATGTCAATGGCGGGAAACTGGACGTTGCA
ATGAATAACAGCGTCTGGAACGTAACAAGTAATTCTAATCTCGACACGCTGGCGCTGAGCCATTCAACTGTCGATTTTGC
CAGCCACGGGTCAACTGCCGGCACATTTGCCACATTAAACGTAGAGAACCTGAGCGGTAACAGTACCTTTATTATGCGTG
CTGATGTTGTTGGCGAGGGTAATGGCGTTAATAATAAAGGGGATTTATTGAATATCAGCGGAAGTAGTGCTGGTAATCAT
GTATTGGCTATCCGCAACCAGGGCAGCGAGGCCACTACGGGAAATGAAGTTCTGACAGTGGTAAAAACCACTGACGGTGC
GGCCTCGTTCAGCGCGTCTTCTCAGGTTGAGTTGGGGGGATATCTGTACGATGTGCGTAAAAATGCCACTAACTGGGAGC
TTTACGCTTCCGGGACAGTTCCGGAACCGACTCCTAATCCTGAACCAACACCGGCTCCCGCTCAGCCTCCCATAGTCAAC
CCCGATCCTACGCCTGAACCCGATCCTACGCCTAACCCCACTCCCACACCTAAACCCACCACGACCGCAGATGCTGGCGG
CAATTATCTCAATGTCGGTTACTTATTAAACTATGTTGAAAACCGTACGCTGATGCAACGAATGGGTGACCTGCGAAATC
AGAGTAAAGACGGTAATATCTGGCTGCGCAGTTATGGGGGAAGCCTGGACTCCTTCGCCAGTGGCAAACTGAGCGGCTTT
GACATGGGTTACAGCGGTATCCAGTTTGGTGGGGATAAACGTCTCTCTGATGTAATGCCGTTGTATGTCGGTCTGTATAT
TGGCTCAACACATGCATCGCCGGACTATAGCGGAGGCGACGGTACCGCACGTTCAGACTACATGGGAATGTATGCCAGTT
ACATGGCACACAACGGTTTTTACAGCGATCTCGTTGTAAAAGCATCGCGCCAGAAAAATAGTTTTCACGTACTGGACAGT
CAGAACAACGGCGTTAACGCCAACGGCACTGCGAATGGATTGAGCATCTCCCTGGAAGCCGGGCAGAGGTTCAACCTGAC
CCCTACTGGTTATGGGTTCTATATAGAGCCGCAAACCCAGCTCACATACAGCCACCAGAATGAGATGGCTATGAAGGCGA
GTAATGGTCTCAATATACATCTGAATCACTACGAATCGCTGCTGGGGCGTGCCAGCATGATACTGGGATATGACATCACC
GCAGGCAACAGCCAGCTGAATATGTATGTGAAGACTGGAGCTATCCGCGAGTTTTCAGGGGATACAGACTATCTGTTGAA
CAACTCCCGGGAGAAGTACAGTTTCAAAGGTAATGGCTGGAATAACGGCGTGGGAGTCAGTGCACAGTATAACAAACAGC
ACACATTCTACCTCGAAGCGGATTACACGCAGAGTAACCTCTTTGATCAGAAGCAAGTCAACGGAGGATATCGCTTCAGC
TTTTAA

Upstream 100 bases:

>100_bases
CACCATACAAATATCATGATGATAAGAGGATATTATTCATTGATTTAAACAAAATGACAAAATCCATAGACCCATAGTCT
GGGTACTATATAGGAGTGGT

Downstream 100 bases:

>100_bases
GTGCGGGATAGACCAGCCCTTAAACGATGCTGAAAAATGTTAGCGTGCGCCGGAATGAAATATAGATCACTCTGATGTAT
CAGAAATCGTCTCTGTCTTT

Product: putative outer membrane autotransporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 961; Mature: 960

Protein sequence:

>961_residues
MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITINEGDRITGDTADPSGNLYGVM
TPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG
IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
GINVQKNSVVDLGTNSSIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSD
ATINFSGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTN
SQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVA
MNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNH
VLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNATNWELYASGTVPEPTPNPEPTPAPAQPPIVN
PDPTPEPDPTPNPTPTPKPTTTADAGGNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGF
DMGYSGIQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAHNGFYSDLVVKASRQKNSFHVLDS
QNNGVNANGTANGLSISLEAGQRFNLTPTGYGFYIEPQTQLTYSHQNEMAMKASNGLNIHLNHYESLLGRASMILGYDIT
AGNSQLNMYVKTGAIREFSGDTDYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQSNLFDQKQVNGGYRFS
F

Sequences:

>Translated_961_residues
MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITINEGDRITGDTADPSGNLYGVM
TPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG
IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
GINVQKNSVVDLGTNSSIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSD
ATINFSGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTN
SQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVA
MNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNH
VLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNATNWELYASGTVPEPTPNPEPTPAPAQPPIVN
PDPTPEPDPTPNPTPTPKPTTTADAGGNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGF
DMGYSGIQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAHNGFYSDLVVKASRQKNSFHVLDS
QNNGVNANGTANGLSISLEAGQRFNLTPTGYGFYIEPQTQLTYSHQNEMAMKASNGLNIHLNHYESLLGRASMILGYDIT
AGNSQLNMYVKTGAIREFSGDTDYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQSNLFDQKQVNGGYRFS
F
>Mature_960_residues
GIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITINEGDRITGDTADPSGNLYGVMT
PAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGI
IIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAMG
INVQKNSVVDLGTNSSIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSDA
TINFSGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTNS
QIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVAM
NNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNHV
LAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNATNWELYASGTVPEPTPNPEPTPAPAQPPIVNP
DPTPEPDPTPNPTPTPKPTTTADAGGNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFD
MGYSGIQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAHNGFYSDLVVKASRQKNSFHVLDSQ
NNGVNANGTANGLSISLEAGQRFNLTPTGYGFYIEPQTQLTYSHQNEMAMKASNGLNIHLNHYESLLGRASMILGYDITA
GNSQLNMYVKTGAIREFSGDTDYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQSNLFDQKQVNGGYRFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI1787452, Length=961, Percent_Identity=97.9188345473465, Blast_Score=1780, Evalue=0.0,
Organism=Escherichia coli, GI87082145, Length=415, Percent_Identity=28.9156626506024, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899
- InterPro:   IPR003991 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 100334; Mature: 100203

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITIN
CCCCCCCCCCHHHEEEEEEECCCCEEEEEECCCCHHHHHHCCEEEEECCCCCCCCEEEEC
EGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLT
CCCEEECCCCCCCCCEEEEEECCCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCEE
ANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSN
ECEEEEEEECCCEEEEEEEEECCEECCCCCCCEEECCCCEEEEECCCCEEEEEEEEECCC
GIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
CEEEEECCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCEEE
GINVQKNSVVDLGTNSSIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTI
EEEEECCCEEEECCCCCEEECCCCCCCEEEECEECCCEEEEEEECCCCCCEEECCCEEEE
GADSHISSAQGGGLVTSGSDATINFSGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDIT
CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCEECCCCCCCCCCEEEEEEEECCCEEE
VDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTNSQIDLTSDLVIDMSTPDQMA
EECCCCEEEEEEEECCCEEECCCEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCEE
IATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVA
EEEECCCCCEEEEECCCCEEEEECCEECCCCEEEEEECCCCEEECCCCCCCCCCCEEEEE
MNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEG
ECCCEEEEECCCCCEEEEEECCEEEHHCCCCCCCEEEEEEEEECCCCEEEEEEEEEEECC
NGVNNKGDLLNISGSSAGNHVLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGG
CCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECE
YLYDVRKNATNWELYASGTVPEPTPNPEPTPAPAQPPIVNPDPTPEPDPTPNPTPTPKPT
EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTADAGGNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGF
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCCCCE
DMGYSGIQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAHNGF
ECCCCCEEECCCCCHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
YSDLVVKASRQKNSFHVLDSQNNGVNANGTANGLSISLEAGQRFNLTPTGYGFYIEPQTQ
CEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEECCCCE
LTYSHQNEMAMKASNGLNIHLNHYESLLGRASMILGYDITAGNSQLNMYVKTGAIREFSG
EEECCCCCEEEEECCCCEEEEHHHHHHHCCEEEEEEEEEECCCCEEEEEEEECCEEECCC
DTDYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQSNLFDQKQVNGGYRFS
CCCCEECCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHCCCCEEEC
F
C
>Mature Secondary Structure 
GIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITIN
CCCCCCCCCHHHEEEEEEECCCCEEEEEECCCCHHHHHHCCEEEEECCCCCCCCEEEEC
EGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLT
CCCEEECCCCCCCCCEEEEEECCCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCEE
ANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSN
ECEEEEEEECCCEEEEEEEEECCEECCCCCCCEEECCCCEEEEECCCCEEEEEEEEECCC
GIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
CEEEEECCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCEEE
GINVQKNSVVDLGTNSSIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTI
EEEEECCCEEEECCCCCEEECCCCCCCEEEECEECCCEEEEEEECCCCCCEEECCCEEEE
GADSHISSAQGGGLVTSGSDATINFSGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDIT
CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCEECCCCCCCCCCEEEEEEEECCCEEE
VDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTNSQIDLTSDLVIDMSTPDQMA
EECCCCEEEEEEEECCCEEECCCEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCEE
IATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVA
EEEECCCCCEEEEECCCCEEEEECCEECCCCEEEEEECCCCEEECCCCCCCCCCCEEEEE
MNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEG
ECCCEEEEECCCCCEEEEEECCEEEHHCCCCCCCEEEEEEEEECCCCEEEEEEEEEEECC
NGVNNKGDLLNISGSSAGNHVLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGG
CCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECE
YLYDVRKNATNWELYASGTVPEPTPNPEPTPAPAQPPIVNPDPTPEPDPTPNPTPTPKPT
EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTADAGGNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGF
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCCCCE
DMGYSGIQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAHNGF
ECCCCCEEECCCCCHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
YSDLVVKASRQKNSFHVLDSQNNGVNANGTANGLSISLEAGQRFNLTPTGYGFYIEPQTQ
CEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEECCCCE
LTYSHQNEMAMKASNGLNIHLNHYESLLGRASMILGYDITAGNSQLNMYVKTGAIREFSG
EEECCCCCEEEEECCCCEEEEHHHHHHHCCEEEEEEEEEECCCCEEEEEEEECCEEECCC
DTDYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQSNLFDQKQVNGGYRFS
CCCCEECCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHCCCCEEEC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 8905232 [H]