| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
Click here to switch to the map view.
The map label for this gene is 157155806
Identifier: 157155806
GI number: 157155806
Start: 3345110
End: 3346396
Strand: Reverse
Name: 157155806
Synonym: EcE24377A_3330
Alternate gene names: NA
Gene position: 3346396-3345110 (Counterclockwise)
Preceding gene: 157155277
Following gene: 157158988
Centisome position: 67.2
GC content: 44.68
Gene sequence:
>1287_bases ATGAGTGAAGTTATCTCAATTTTTGAATATGACCTGTTGGGGAGTGGAAAAGCGGCTTCAGTTGGCGCAAAGTTGGTGCC TCAACAGGTCTTTGATTATTTAGAAACACTTAGCCTAACAAGTGAGCAAGGAAGCCAGTTTCTCAAACTCACCTCTCGTT CAGGTTTCAAATTGCTGCAGGTACAAAACTACGCGGGGATGCTTTCTACACCTCACGGTTTGCAGCTTGAGATACTGCCC AAGATTGGTAAAAACCTCACGCTTGCGAGTGCGCGAGAAACATTCATTACGATGCTAAGTCACCTACCTAGGTTTCGACA CATTCAAACCCAGCAGGCCACTCTTCAGGCGCAACGCATGCCTTTGCTCGAGATTTTTATCAGCCAATTTTTGCAAAGCG TCAGTCAATTGCTTAAACAAGGTTTACGCTCCGACTATGTGAGTGAGAAAGGTAATCTGGCTTTTATGAAGGGCAAACTG ATGCTCTCTGCACAACTGCGACATAACGCGGTGAATCGCCATAAGTTTTGTGTCGATTATGATGAGTATATGCCTGATTG TGCTGCCAATCGGCTCTTACACTCCACACTGGATAAGTTACTTAGTCTGAAGCTGTCATCAGAGAATCAACGCTGGCTTT ACGAACTGTGCTTTGCTTTTGACGGTATTCCACTTAGTAGGGATATAGAGAGCGATCTGAACAGCTTACGCATTGAGCGT GGTATGACTCATTACAGCGAGCCAATAGCTTGGGCGCAGTTGATCCTGAGAGGAATGAGCCCAAGTGCATTGCAAGGAAA CACCAAAGCGATATCACTTTTGTTTCCTATGGAAGCGGTATTTGAATCCTTTGTGGCACAGACCCTACCCTACGAATTAC CTTCTCACCTAAAAGTTTTTTCTCAAGCAGCAACGTATTCTTTGGTAAAGCATGGACTCAAAGATTGCTTTAAGCTTCGC CCAGACTTGCTGATTCAATCTCGGCAACCGATTCAAACCAAAATGGTGATGGATACAAAATGGAAGCAGGTGAATAGCAG CCAGCAAAAAAAATCACTTTATGGGCTAGCGCAATCCGACTTCTATCAAATGTTTGCCTACGGCCAAAAATACCTTGGCG GAACAGGCGAAATGTACCTGATTTACCCTGCGCATGATGACTTTAGCCAACCGATACCGCAGCACTTTGCTTTTTCAGAG ACTTTAAAATTATGGGTTGTGCCATACCGGATAATGGCAAAACGTGGTGAGAGGATGATGTGGGCAAGTGATGTGTTAGC TACATAG
Upstream 100 bases:
>100_bases GAGCTCAAAGATCTCGATCAAGGGGTCTGGAATATGCCAAAGGCTTATCGTTCAATTTATCAGCCACAGCGGACCACTCC TGATGAGCAGGTCGTAAACC
Downstream 100 bases:
>100_bases TGACTAAGCCATTTAGAATGGGCCAGTCCAAAACATCGACGCTGTCTCAGGCAAAGTGGTTGTGTTGACAGGAATGGAGA CAGTAGTGAACCGCCCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: 5-Methylcytosine Restriction System Component-Like Protein; 5-Methylcytosine Restriction System Component; McrBC 5-Methylcytosine Restriction System Component-Like; McrBC Catalytic Subunit McrC; McrBC Restriction Endonuclease System Subunit McrC; 5-Methylcytosine-Specific Restriction Protein C; McrBC 5-Methylcytosine Restriction Subunit McrC; 5-Methylcytosine Restriction System Component- Like Protein
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSEVISIFEYDLLGSGKAASVGAKLVPQQVFDYLETLSLTSEQGSQFLKLTSRSGFKLLQVQNYAGMLSTPHGLQLEILP KIGKNLTLASARETFITMLSHLPRFRHIQTQQATLQAQRMPLLEIFISQFLQSVSQLLKQGLRSDYVSEKGNLAFMKGKL MLSAQLRHNAVNRHKFCVDYDEYMPDCAANRLLHSTLDKLLSLKLSSENQRWLYELCFAFDGIPLSRDIESDLNSLRIER GMTHYSEPIAWAQLILRGMSPSALQGNTKAISLLFPMEAVFESFVAQTLPYELPSHLKVFSQAATYSLVKHGLKDCFKLR PDLLIQSRQPIQTKMVMDTKWKQVNSSQQKKSLYGLAQSDFYQMFAYGQKYLGGTGEMYLIYPAHDDFSQPIPQHFAFSE TLKLWVVPYRIMAKRGERMMWASDVLAT
Sequences:
>Translated_428_residues MSEVISIFEYDLLGSGKAASVGAKLVPQQVFDYLETLSLTSEQGSQFLKLTSRSGFKLLQVQNYAGMLSTPHGLQLEILP KIGKNLTLASARETFITMLSHLPRFRHIQTQQATLQAQRMPLLEIFISQFLQSVSQLLKQGLRSDYVSEKGNLAFMKGKL MLSAQLRHNAVNRHKFCVDYDEYMPDCAANRLLHSTLDKLLSLKLSSENQRWLYELCFAFDGIPLSRDIESDLNSLRIER GMTHYSEPIAWAQLILRGMSPSALQGNTKAISLLFPMEAVFESFVAQTLPYELPSHLKVFSQAATYSLVKHGLKDCFKLR PDLLIQSRQPIQTKMVMDTKWKQVNSSQQKKSLYGLAQSDFYQMFAYGQKYLGGTGEMYLIYPAHDDFSQPIPQHFAFSE TLKLWVVPYRIMAKRGERMMWASDVLAT >Mature_427_residues SEVISIFEYDLLGSGKAASVGAKLVPQQVFDYLETLSLTSEQGSQFLKLTSRSGFKLLQVQNYAGMLSTPHGLQLEILPK IGKNLTLASARETFITMLSHLPRFRHIQTQQATLQAQRMPLLEIFISQFLQSVSQLLKQGLRSDYVSEKGNLAFMKGKLM LSAQLRHNAVNRHKFCVDYDEYMPDCAANRLLHSTLDKLLSLKLSSENQRWLYELCFAFDGIPLSRDIESDLNSLRIERG MTHYSEPIAWAQLILRGMSPSALQGNTKAISLLFPMEAVFESFVAQTLPYELPSHLKVFSQAATYSLVKHGLKDCFKLRP DLLIQSRQPIQTKMVMDTKWKQVNSSQQKKSLYGLAQSDFYQMFAYGQKYLGGTGEMYLIYPAHDDFSQPIPQHFAFSET LKLWVVPYRIMAKRGERMMWASDVLAT
Specific function: Unknown
COG id: COG4268
COG function: function code V; McrBC 5-methylcytosine restriction system component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48714; Mature: 48583
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVISIFEYDLLGSGKAASVGAKLVPQQVFDYLETLSLTSEQGSQFLKLTSRSGFKLLQ CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEE VQNYAGMLSTPHGLQLEILPKIGKNLTLASARETFITMLSHLPRFRHIQTQQATLQAQRM EECCCCCCCCCCCCEEEEEHHCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC PLLEIFISQFLQSVSQLLKQGLRSDYVSEKGNLAFMKGKLMLSAQLRHNAVNRHKFCVDY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHCCCCEEEEH DEYMPDCAANRLLHSTLDKLLSLKLSSENQRWLYELCFAFDGIPLSRDIESDLNSLRIER HHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GMTHYSEPIAWAQLILRGMSPSALQGNTKAISLLFPMEAVFESFVAQTLPYELPSHLKVF CCHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHH SQAATYSLVKHGLKDCFKLRPDLLIQSRQPIQTKMVMDTKWKQVNSSQQKKSLYGLAQSD HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FYQMFAYGQKYLGGTGEMYLIYPAHDDFSQPIPQHFAFSETLKLWVVPYRIMAKRGERMM HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE WASDVLAT EHHHHHCC >Mature Secondary Structure SEVISIFEYDLLGSGKAASVGAKLVPQQVFDYLETLSLTSEQGSQFLKLTSRSGFKLLQ CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEE VQNYAGMLSTPHGLQLEILPKIGKNLTLASARETFITMLSHLPRFRHIQTQQATLQAQRM EECCCCCCCCCCCCEEEEEHHCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC PLLEIFISQFLQSVSQLLKQGLRSDYVSEKGNLAFMKGKLMLSAQLRHNAVNRHKFCVDY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHCCCCEEEEH DEYMPDCAANRLLHSTLDKLLSLKLSSENQRWLYELCFAFDGIPLSRDIESDLNSLRIER HHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GMTHYSEPIAWAQLILRGMSPSALQGNTKAISLLFPMEAVFESFVAQTLPYELPSHLKVF CCHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHH SQAATYSLVKHGLKDCFKLRPDLLIQSRQPIQTKMVMDTKWKQVNSSQQKKSLYGLAQSD HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FYQMFAYGQKYLGGTGEMYLIYPAHDDFSQPIPQHFAFSETLKLWVVPYRIMAKRGERMM HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE WASDVLAT EHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA