| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is phnH [H]
Identifier: 157155684
GI number: 157155684
Start: 4652549
End: 4653133
Strand: Reverse
Name: phnH [H]
Synonym: EcE24377A_4654
Alternate gene names: 157155684
Gene position: 4653133-4652549 (Counterclockwise)
Preceding gene: 157156248
Following gene: 157155144
Centisome position: 93.44
GC content: 62.56
Gene sequence:
>585_bases ATGACCCTGGAAACCGCTTTTATGCTTCCCGTGCAGGATGCCCAGCACAGTTTTCGTCGCCTGTTAAAGGCCATGAGCGA GCCGGGCGTGATTGTCGCCCTGCATCAGCTCAAGCGCGGCTGGCAGCCGCTGAATATCGCCACCACCAGCGTGCTGCTGA CGCTGGCCGATAACGACACGCCGGTGTGGCTTGCCGCGCCATTGAGTAACGATATCGTCAGCCAGAGCCTGCGTTTTCAT ACCAACGCGCCGCTGGTCAGCCAGCCGGAACAGGCGATCTTCGCGGTGACGGATGAGGCGATTTCCAGCGAACAGCTTAA CGCCCTTTCCACCGGCACCGCCGTTGCGCCGGAAGCGGGTGCAACGCTGATTTTACAGGTCGCCAGCCTGAGCGGCGGGC GCATGTTACGTCTCACCGGCGCGGGCATTGCCGAAGAACGAATGATCGCTCCGCAGCTGCCGGAGTGCATTCTGCACGAA CTCACCGAGCGCCCGCACCCGTTCCCGCTCGGCATCGACCTGATCCTGACCTGCGGCGAGCGCCTGCTGGCTATTCCGCG AACCACTCATGTGGAGGTGTGCTGA
Upstream 100 bases:
>100_bases CCCCGCTGGACGCTGACCGTATGGCACGCATTGCCGCACGCCAGGCCGAAGTGAACGCCAGCCGGGTCGACTTCTTTACG ATGGTTCGCGGAGACAACGC
Downstream 100 bases:
>100_bases TGTACGTTGCCGTGAAAGGGGGCGAGAAGGCGATCGACGCCGCTCACGCCCTGCAAGAGAGCCGACGCCGGGGCGATACC GATTTGCCTGAACTGAGCGT
Product: carbon-phosphorus lyase complex subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLAAPLSNDIVSQSLRFH TNAPLVSQPEQAIFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHE LTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC
Sequences:
>Translated_194_residues MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLAAPLSNDIVSQSLRFH TNAPLVSQPEQAIFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHE LTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC >Mature_193_residues TLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLAAPLSNDIVSQSLRFHT NAPLVSQPEQAIFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHEL TERPHPFPLGIDLILTCGERLLAIPRTTHVEVC
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3625
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnH family [H]
Homologues:
Organism=Escherichia coli, GI1790538, Length=194, Percent_Identity=97.4226804123711, Blast_Score=383, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008772 [H]
Pfam domain/function: PF05845 PhnH [H]
EC number: NA
Molecular weight: Translated: 20940; Mature: 20808
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT CCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCEEEEEEEEEEEECCCC PVWLAAPLSNDIVSQSLRFHTNAPLVSQPEQAIFAVTDEAISSEQLNALSTGTAVAPEAG CEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHCHHHHHHHCCCCCCCCCCC ATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGE CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCH RLLAIPRTTHVEVC HHEECCCCCEEECC >Mature Secondary Structure TLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT CCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCEEEEEEEEEEEECCCC PVWLAAPLSNDIVSQSLRFHTNAPLVSQPEQAIFAVTDEAISSEQLNALSTGTAVAPEAG CEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHCHHHHHHHCCCCCCCCCCC ATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGE CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCH RLLAIPRTTHVEVC HHEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]