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The map label for this gene is cas1 [H]

Identifier: 157155405

GI number: 157155405

Start: 3057621

End: 3058541

Strand: Reverse

Name: cas1 [H]

Synonym: EcE24377A_3057

Alternate gene names: 157155405

Gene position: 3058541-3057621 (Counterclockwise)

Preceding gene: 157155574

Following gene: 157158131

Centisome position: 61.42

GC content: 51.79

Gene sequence:

>921_bases
GTGACGTTTGTACCACTGAGCCCGATCCCATTAAAAGATCGCACCACCATGATCTTCCTCCAGTACGGTCAGATCGACGT
ACTGGACGGCGCTTTCGTGCTGATCGACAAAACAGGGATCCGCACACATATTCCGGTAGGATCGGTCGCCTGCATTATGC
TCGAACCGGGAACGAGAGTTTCCCACGCGGCGGTGCATCTGGCCGCCACGGTGGGAACACTGCTGGTCTGGGTCGGTGAA
GCGGGCGTTCGCGTTTACTCATCCGGACAACCCGGAGGGGCGCGGGCAGATAAATTACTCTACCAGGCAAAGCTGGCTTT
AACGGAAGATCTACGCCTGAAGGTGGTGCGCAAAATGTATGAATTACGTTTTCGTGAGCCACCGCCAGCTCGCCGTTCAG
TGGAGCAGCTACGTGGAATTGAGGGATCTCGCGTTCGCCAGACGTATGCATTACTGGCGAAACAATATGGTGTGAAATGG
AATGGTCGCAAATACGATCCTAAAGACTGGGAAAAAGGCGATGTTGTGAATCGCTGCATCAGTGCTGCTACATCATGTCT
GTACGGTATATCTGAAGCGGCAGTATTAGCCGCGGGATATGCGCCCGCTATTGGGTTTATCCATAGTGGCAAACCGCTTT
CATTTGTTTATGACATAGCCGATATCATTAAATTTGATTCGGTTGTACCAAAGGCATTTGAAATAGCGGCGAGGCAACCC
GCAGAACCTGATAAAGAAGTCAGATTAGCCTGTCGTGATATTTTCCGTAGCACTAAGTTAACGGGCAAATTAATACCGTT
AATTGAGGAAGTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAAC
CTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGA

Upstream 100 bases:

>100_bases
TCACCGATCCTGGGTTATTTCTGCAACGTCTGAGCCAGGGGTATGGCAAAAGCCGGGCGTTCGGCTGTGGTCTGATGCTG
ATCAAACCCGGAGCCGAGGC

Downstream 100 bases:

>100_bases
TGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGACTACTGGAAGTGCGT
GCCGGTGTGTATGTTGGTGA

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTFVPLSPIPLKDRTTMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGE
AGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQP
AEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRG

Sequences:

>Translated_306_residues
MTFVPLSPIPLKDRTTMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGE
AGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQP
AEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRG
>Mature_305_residues
TFVPLSPIPLKDRTTMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEA
GVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWN
GRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPA
EPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRG

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=303, Percent_Identity=84.8184818481848, Blast_Score=533, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 33396; Mature: 33265

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVPLSPIPLKDRTTMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRV
CCCCCCCCCCCCCCCEEEEEEECCEEEECCEEEEEECCCCEEECCCCCEEEEEECCCCCH
SHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMY
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCI
HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
SAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQP
HHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCC
AEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDS
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GHRGRG
CCCCCC
>Mature Secondary Structure 
TFVPLSPIPLKDRTTMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRV
CCCCCCCCCCCCCCEEEEEEECCEEEECCEEEEEECCCCEEECCCCCEEEEEECCCCCH
SHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMY
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCI
HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
SAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQP
HHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCC
AEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDS
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GHRGRG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]