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The map label for this gene is ycfZ [H]

Identifier: 157155014

GI number: 157155014

Start: 1257937

End: 1258725

Strand: Reverse

Name: ycfZ [H]

Synonym: EcE24377A_1243

Alternate gene names: 157155014

Gene position: 1258725-1257937 (Counterclockwise)

Preceding gene: 157155386

Following gene: 157155372

Centisome position: 25.28

GC content: 42.33

Gene sequence:

>789_bases
ATGAAAAAATTCATTATACTGCTCAGTTTACTAATACTCCTGCCTCTGGTAGCAACCAGTAAACCATTGATTCCAATAAT
GAAGACACTTTTTACGGATGTTACCGGTACTGTACCGGATGCTGAAGAGATCGCACGTAAAGCCGAGCTTTTTCGCCAAC
AAACGGGAATTGCACCGTTTATTGTGATTTTACCCGACATTAATAATGAAGCCAGTCTCAGACAAAATGGTAAAGCGATG
CTGGCGCATGCGTCATCTTCATTGAGTAATGTAAAAGGAAGTGTTCTGTTACTATTTACTACCCGCGAACCACGGTTAAT
TATGATCACCAACGGCCAGGTTGAAAGTGGTCTGGACGATAAACATCTCGGCCTTCTGATAGAAAATCACACGCTGGCTT
ATTTAAATGCAGATCTCTGGTATCAGGGAATCAATAATGCATTGGCTGTTCTACAAGCACAGATATTAAAACAACCGACG
CCGCCACTGACGTATTATCCGCATCCAGGACAACAGCATGAAAATGCTCCCCCCGGCAGCACCAACACATTAGGTTTTAT
CGCCTGGGCTGCGACGTTTATCTTATTTTCCTGGATCTTTTGCTACACGACTCGTTTTATTTATGCGTTAAAATTTGCAG
TGGCGATGACTATTGCCAATATGGGTTATCAGGCTTTATGTTTGTATATCGATAATAGCTTTGCGATTACCAGAATATCG
CCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAACGATAA

Upstream 100 bases:

>100_bases
GGGGCTTTGTTGGCATAGCAGGCATTATTTTCGGTAGTGTCGGTCTGATAATCACGCTCCCCTCCACCAAAAAATCTCGC
AGGAAACGGAAGTCCCGCCC

Downstream 100 bases:

>100_bases
AAGAGGCCGGAAAAGTGCGCGTGTATTATGCCGGATGGGGCGCGAACGCCTTATCCGGCCCACAAAACCCGCAAATTCAA
TTAATTGCGTCCCCTTGTAG

Product: hypothetical protein

Products: nicotinate; N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKKFIILLSLLILLPLVATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAM
LAHASSSLSNVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPT
PPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRIS
PLWAGLIGVCTFIAALLLTSKR

Sequences:

>Translated_262_residues
MKKFIILLSLLILLPLVATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAM
LAHASSSLSNVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPT
PPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRIS
PLWAGLIGVCTFIAALLLTSKR
>Mature_262_residues
MKKFIILLSLLILLPLVATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAM
LAHASSSLSNVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPT
PPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRIS
PLWAGLIGVCTFIAALLLTSKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787365, Length=262, Percent_Identity=96.9465648854962, Blast_Score=492, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.2.21

Molecular weight: Translated: 28905; Mature: 28905

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFIILLSLLILLPLVATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPF
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
IVILPDINNEASLRQNGKAMLAHASSSLSNVKGSVLLLFTTREPRLIMITNGQVESGLDD
EEEEECCCCCCHHHHCCCEEEEEHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCC
KHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGS
CCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
TNTLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEHH
PLWAGLIGVCTFIAALLLTSKR
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFIILLSLLILLPLVATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPF
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
IVILPDINNEASLRQNGKAMLAHASSSLSNVKGSVLLLFTTREPRLIMITNGQVESGLDD
EEEEECCCCCCHHHHCCCEEEEEHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCC
KHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGS
CCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
TNTLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEHH
PLWAGLIGVCTFIAALLLTSKR
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-nicotinate D-ribonucleotide; dimethylbenzimidazole

Specific reaction: beta-nicotinate D-ribonucleotide + dimethylbenzimidazole = nicotinate + N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]