| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is insC1 [C]
Identifier: 157154759
GI number: 157154759
Start: 4853337
End: 4853726
Strand: Reverse
Name: insC1 [C]
Synonym: EcE24377A_4862
Alternate gene names: 157154759
Gene position: 4853726-4853337 (Counterclockwise)
Preceding gene: 157156105
Following gene: 157155123
Centisome position: 97.47
GC content: 51.79
Gene sequence:
>390_bases GTGTCAGATATGCAGAAAAATGTGACTCCCGGCAGGCGAAAAGGCTGCCCTAATTATCCTCCCGAATTTAAACAGCAGCT CGTTGCTGCCTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCCAATCTGTTGTTCA AATGGCGACAACAATGGCGCGAGGGAAAGCTGCTATTACCTTCTTCAGAGAGCCCCCAGCTACTTCCTGTGACTCTCGAT GCAGCTGCCGAACAGCCAGAATCGCTCGCAGAGGACCCGGAAACCCTCAGTATCAGCTGTGAGGTAACGTTCCGGCACGG GACGCTCCGCTTCAATGGCAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGATGA
Upstream 100 bases:
>100_bases TTGTGGTCAACTAAAACGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACAAATTAGACAAAGTGGTGTCCACCA AATAAGTAGTGGGAACCAAA
Downstream 100 bases:
>100_bases TCCCGTTACCTTCCGGGACCAAAATTTGGCTGGTTGCCGGTATCACCGATATGAGAAATGGCTTCAACGGCCTGGCTGCG AAAGTACAAACGGCGCTGAA
Product: IS66 family orf1
Products: NA
Alternate protein names: IS66 Family Transposase OrfA; Transposase TnpA Protein
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLD AAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR
Sequences:
>Translated_129_residues MSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLD AAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR >Mature_128_residues SDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLDA AAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR
Specific function: Involved in the transposition of the insertion sequence is2 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14404; Mature: 14272
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHC EGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLL CCCEECCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEEEEEEECCEEEECCCHHHHHH TLLIQELKR HHHHHHHCC >Mature Secondary Structure SDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHC EGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLL CCCEECCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEEEEEEECCEEEECCCHHHHHH TLLIQELKR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA