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The map label for this gene is 156978697

Identifier: 156978697

GI number: 156978697

Start: 414252

End: 414506

Strand: Reverse

Name: 156978697

Synonym: SAHV_0366

Alternate gene names: NA

Gene position: 414506-414252 (Counterclockwise)

Preceding gene: 156978701

Following gene: 156978696

Centisome position: 14.39

GC content: 34.12

Gene sequence:

>255_bases
ATTAATATAGGGTACATATTCACAAATGCAGCTGGTGGCCCTATCGACTCGAACAAAATTAGCAACATTATTAAAGGGGG
CACTATCAAAGAGACAACTGAGATTAGTTCTATTAAGAAACCTGTAACGACGCATACATTACATCATTCGCATATATCTA
CACTTGCTCAATTAGGAATTAACTTAAAAGCAATGCAAGAGCATGTAGGTCATTCAGATTATAAAAAATCTAGAGATATA
CACACATGTTACTAA

Upstream 100 bases:

>100_bases
TAAAAGAGACAACTAGAACAAGTAACAGCTATAGGGCTATAGGCCTCACTATCCATAGCATCGACTTACTAAGAACACTT
ATGCTTGTAATGATAAGTTT

Downstream 100 bases:

>100_bases
TCAGATGGCGAAAGATATGATGAATAAATTTGAACGATTGGGGAGTTAAAATTGGAAAAAGATGATATACTAGCAGAAAT
TAAGCCTATGCTCAATTTTG

Product: truncated integrase

Products: NA

Alternate protein names: Prophage; Truncated Integrase

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MNIGYIFTNAAGGPIDSNKISNIIKGGTIKETTEISSIKKPVTTHTLHHSHISTLAQLGINLKAMQEHVGHSDYKKSRDI
HTCY

Sequences:

>Translated_84_residues
MNIGYIFTNAAGGPIDSNKISNIIKGGTIKETTEISSIKKPVTTHTLHHSHISTLAQLGINLKAMQEHVGHSDYKKSRDI
HTCY
>Mature_84_residues
MNIGYIFTNAAGGPIDSNKISNIIKGGTIKETTEISSIKKPVTTHTLHHSHISTLAQLGINLKAMQEHVGHSDYKKSRDI
HTCY

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9215; Mature: 9215

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGYIFTNAAGGPIDSNKISNIIKGGTIKETTEISSIKKPVTTHTLHHSHISTLAQLGI
CCCEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
NLKAMQEHVGHSDYKKSRDIHTCY
CHHHHHHHCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MNIGYIFTNAAGGPIDSNKISNIIKGGTIKETTEISSIKKPVTTHTLHHSHISTLAQLGI
CCCEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
NLKAMQEHVGHSDYKKSRDIHTCY
CHHHHHHHCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA