| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978320
Identifier: 156978320
GI number: 156978320
Start: 2196719
End: 2197270
Strand: Direct
Name: 156978320
Synonym: VIBHAR_07127
Alternate gene names: NA
Gene position: 2196719-2197270 (Clockwise)
Preceding gene: 156978315
Following gene: 156978321
Centisome position: 99.67
GC content: 47.83
Gene sequence:
>552_bases ATGAAAAAACAAGCAATGATGATGGCCCTACTTAGTGCAGGCCTTATCGGACAAAATGTATATGCATTATCATCAACTTC TAATATTGAATGGGTCGGTGTGGTGCCTGGAGGGATTAACGGTGATCAAATTGGTCTGACAGGTCAAAACGGCGGTACTG TTAACCAGGGTGAGCTGGCTATAACACAAGACGGCGCCTTTACTACGCGATTACCTGTCATTCTCGAAGCGCATGAGATG GTTGACGACGGCACCAACAGCGGTAATCTTGTGCCTGGTCCTAAATTCTATTCTGGTGATGTGGATTGGACTTTGGGCTC TGTCTATGTAACCAACCCGGCGTATGATACTACGGACGAGGTCAATGACGTTAAAATCGTGATGAACGGTCATGAGCTTA GTAGAGGTACCCCAGTGACGATTGCAGAAGGCTTGCACCAAATGCAATTTAGCGCATCGTCTGAAGGTCCGAGTAATGGT TCAGTCCTTCCGAATCAGACTGTCGTGGCCACGGCGACGATCTTTGCTGAAGGAAACGGCGGCTCTCTTTAA
Upstream 100 bases:
>100_bases CGATTTGAGTCACGACCGCATATTTTAGGTAAATGGGCTTTCAGTAAAGAATGAAAGCTTAAATTTATGGGATAGCGATA AATTAATATAGGTATTCTTA
Downstream 100 bases:
>100_bases GGCATATAGAGCAGTCCGGCTCGTAATAAGTAAATAAGGCAGGGAGCTGCCTTATTATTTTTTGGTCTTTTTATGGGTGT AAAGTATGCGTTACTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKKQAMMMALLSAGLIGQNVYALSSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELAITQDGAFTTRLPVILEAHEM VDDGTNSGNLVPGPKFYSGDVDWTLGSVYVTNPAYDTTDEVNDVKIVMNGHELSRGTPVTIAEGLHQMQFSASSEGPSNG SVLPNQTVVATATIFAEGNGGSL
Sequences:
>Translated_183_residues MKKQAMMMALLSAGLIGQNVYALSSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELAITQDGAFTTRLPVILEAHEM VDDGTNSGNLVPGPKFYSGDVDWTLGSVYVTNPAYDTTDEVNDVKIVMNGHELSRGTPVTIAEGLHQMQFSASSEGPSNG SVLPNQTVVATATIFAEGNGGSL >Mature_183_residues MKKQAMMMALLSAGLIGQNVYALSSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELAITQDGAFTTRLPVILEAHEM VDDGTNSGNLVPGPKFYSGDVDWTLGSVYVTNPAYDTTDEVNDVKIVMNGHELSRGTPVTIAEGLHQMQFSASSEGPSNG SVLPNQTVVATATIFAEGNGGSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18972; Mature: 18972
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQAMMMALLSAGLIGQNVYALSSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELA CCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCEE ITQDGAFTTRLPVILEAHEMVDDGTNSGNLVPGPKFYSGDVDWTLGSVYVTNPAYDTTDE EEECCCEEEECCEEEEEHHHHCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCCC VNDVKIVMNGHELSRGTPVTIAEGLHQMQFSASSEGPSNGSVLPNQTVVATATIFAEGNG CCEEEEEECCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEEEEEECCC GSL CCC >Mature Secondary Structure MKKQAMMMALLSAGLIGQNVYALSSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELA CCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCEE ITQDGAFTTRLPVILEAHEMVDDGTNSGNLVPGPKFYSGDVDWTLGSVYVTNPAYDTTDE EEECCCEEEECCEEEEEHHHHCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCCC VNDVKIVMNGHELSRGTPVTIAEGLHQMQFSASSEGPSNGSVLPNQTVVATATIFAEGNG CCEEEEEECCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEEEEEECCC GSL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA