Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156978311

Identifier: 156978311

GI number: 156978311

Start: 2189340

End: 2189933

Strand: Direct

Name: 156978311

Synonym: VIBHAR_07118

Alternate gene names: NA

Gene position: 2189340-2189933 (Clockwise)

Preceding gene: 156978310

Following gene: 156978315

Centisome position: 99.33

GC content: 44.28

Gene sequence:

>594_bases
ATGAAGGTATCCAACATTTTAGTGGCGTTGACGATGAGTTTTTTCACTGCTGGCGCTAGTGCAGCCAGTCCATCATTCGA
TTGCAACAATGATTCTTTAAGTGGAGCTGAGCAAGCCATTTGTCAAAGTGAAATGTTGAGCCAGCTTGATAGACAGATGT
CCGAAGTCTACAAAAAGGCGAAAGCGGTGGACGATAAACAAGCTGGTCAACACGCGCTGAAAGCTGAGCAAGTTGGTTGG
ATTCGAGGGCGAAATGAGTGTTGGAAGAGTAATGATGAAGAACAATGTTTGAAGCAGGAATATGAATACCGAATTGCAGA
ACTTCAAACGCGTTATAGACTCGTCGGTAACTTTGGGGCGGAATTTTACGCTTGTGACGGAAATAAAGCGAAAGAAGTGG
TGCTAACACGTTATATGACGGATCCAACTACCCTGATGGCTGAGTTTGGTGACAGTTCCGTTTTTATGGCAGCCTCAGAT
AAAGATGGTCTCTTCTTGGGTCGAAACGAAAAAGTTCAATACGAGGACGAAGGAATGGTTGCCGTTCAATGGGGATATGA
GGCACCTCTTATGAAGTGTAAGCTCAGAGATTAA

Upstream 100 bases:

>100_bases
CTTATTTACTTCATCATTTAAACGTTGAACAAGTCTCTGTTTCTCAGTTTAAAAAGAAGTTGACTAGACTCAAGATGACG
GAAAATCAGGGAGAGATTCT

Downstream 100 bases:

>100_bases
CCTTCAAGAATAAACAAAAACAAGGTCAGCTACTGGGCTGACCTTACTGATTTAACATGCCTCAGCATGATGCTCTTGTT
GAAAGCGAGAATCTTGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKVSNILVALTMSFFTAGASAASPSFDCNNDSLSGAEQAICQSEMLSQLDRQMSEVYKKAKAVDDKQAGQHALKAEQVGW
IRGRNECWKSNDEEQCLKQEYEYRIAELQTRYRLVGNFGAEFYACDGNKAKEVVLTRYMTDPTTLMAEFGDSSVFMAASD
KDGLFLGRNEKVQYEDEGMVAVQWGYEAPLMKCKLRD

Sequences:

>Translated_197_residues
MKVSNILVALTMSFFTAGASAASPSFDCNNDSLSGAEQAICQSEMLSQLDRQMSEVYKKAKAVDDKQAGQHALKAEQVGW
IRGRNECWKSNDEEQCLKQEYEYRIAELQTRYRLVGNFGAEFYACDGNKAKEVVLTRYMTDPTTLMAEFGDSSVFMAASD
KDGLFLGRNEKVQYEDEGMVAVQWGYEAPLMKCKLRD
>Mature_197_residues
MKVSNILVALTMSFFTAGASAASPSFDCNNDSLSGAEQAICQSEMLSQLDRQMSEVYKKAKAVDDKQAGQHALKAEQVGW
IRGRNECWKSNDEEQCLKQEYEYRIAELQTRYRLVGNFGAEFYACDGNKAKEVVLTRYMTDPTTLMAEFGDSSVFMAASD
KDGLFLGRNEKVQYEDEGMVAVQWGYEAPLMKCKLRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22130; Mature: 22130

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSNILVALTMSFFTAGASAASPSFDCNNDSLSGAEQAICQSEMLSQLDRQMSEVYKKA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVDDKQAGQHALKAEQVGWIRGRNECWKSNDEEQCLKQEYEYRIAELQTRYRLVGNFGA
HCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EFYACDGNKAKEVVLTRYMTDPTTLMAEFGDSSVFMAASDKDGLFLGRNEKVQYEDEGMV
EEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCEEECCCCCEEECCCCEE
AVQWGYEAPLMKCKLRD
EEEECCCCCCEEEECCC
>Mature Secondary Structure
MKVSNILVALTMSFFTAGASAASPSFDCNNDSLSGAEQAICQSEMLSQLDRQMSEVYKKA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVDDKQAGQHALKAEQVGWIRGRNECWKSNDEEQCLKQEYEYRIAELQTRYRLVGNFGA
HCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EFYACDGNKAKEVVLTRYMTDPTTLMAEFGDSSVFMAASDKDGLFLGRNEKVQYEDEGMV
EEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCEEECCCCCEEECCCCEE
AVQWGYEAPLMKCKLRD
EEEECCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA