| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978309
Identifier: 156978309
GI number: 156978309
Start: 2187636
End: 2188628
Strand: Direct
Name: 156978309
Synonym: VIBHAR_07116
Alternate gene names: NA
Gene position: 2187636-2188628 (Clockwise)
Preceding gene: 156978308
Following gene: 156978310
Centisome position: 99.26
GC content: 46.73
Gene sequence:
>993_bases GTGAACGCAGGTACTTATACCCTTGGTGCGAGCATAGGTGGCACTCAGTTGGCTAATGATATTGAGCTTACTTTTAATGC CGTCATTGATTTATCACAGTCGACATTGCAAGCCGACATCACCACCATCGCGGCAGATGGCAGTAGTACTGCTCAATTGA CCATCACGCTGAAAGACTACGCTGGCAATGCGTTTGTTCCAGCATCGAACATTCCTGAGCTCACGACTACAGCGGGCTCT GCTGATATGACTGATTTAGTGAATACTAGCGATGGGGTGTACACAAGCAACATTAGCTCTAGTGTTGTTGGTGAGGTCAC TGTTACTGCGACCTATGACTCAGGAACCGTTGGCATGCTAAACCTCACATTTGAGGCGTTACCGCCAAGTGATTCTCAGT CTACCATCACAAGTGATATTTCTACCTTTGGTGTGGGTGGCGATCATAGTGCAGTTATCACGGTTGCTTTAAAGAAAGCT GATGGCAGTGCTTACACACAAAGCTACGGTGATTTGGTGTTGAGCCCGGAAGGTACGGGGCTAAGCTATGATACTCCTGT AGATAATGGTGATGGTACGTACACGGTGTCAGTTACTGCAGATACAGCTGGCAGTTATGTCGTGAGTGCTACCGTTGGGG ATTTAGTACTGACAAATACGGTGTCGCTCACTGTTACTCAAGTCGATGTTGCTTTAAGTGGCGCGACTCCTGCCTCGATA ACAGATTCAACAACGATAACTGTTACCTTACGAGACGGCTCTGGCAACATCATTACGCATGGAGGGCACAATATTAGTGT TCGCTTTGCGAGTAGCATTATCAATCAATTGGGCATTGCAACATTCGGTGATGCTCAGTTCAATAGTCTAGACGGTACGT ATGATGTAGCGGTTACATGTACTACTCCGACTGAGGGCGATAGTTATAACGTGTCGGTTAAGGTAGATGATTATAGTGAT GTGGTGGCTACTATCCCGTTGAGTTGCCCTTAA
Upstream 100 bases:
>100_bases CATCGTCTGCGGGGGAGATTTCATTCTCTGTGCCTAGTGGGGTAACGGAAGAATCAAAAACAGCAACGGTGATGGCTCGT ATACGGCTGTCTTTACAACA
Downstream 100 bases:
>100_bases TTAAATCAGCTACGCTTTGTTATTAAAAATGCCACTCAACACTGAGTGGCATTTTTATACGTCGTTTTTTCTAAGATTGT TTAGACCGAAGTAACCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDYAGNAFVPASNIPELTTTAGS ADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGMLNLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKA DGSAYTQSYGDLVLSPEGTGLSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTCTTPTEGDSYNVSVKVDDYSD VVATIPLSCP
Sequences:
>Translated_330_residues MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDYAGNAFVPASNIPELTTTAGS ADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGMLNLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKA DGSAYTQSYGDLVLSPEGTGLSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTCTTPTEGDSYNVSVKVDDYSD VVATIPLSCP >Mature_330_residues MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDYAGNAFVPASNIPELTTTAGS ADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGMLNLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKA DGSAYTQSYGDLVLSPEGTGLSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTCTTPTEGDSYNVSVKVDDYSD VVATIPLSCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33495; Mature: 33495
Theoretical pI: Translated: 3.51; Mature: 3.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDY CCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCHHEEEEEEEEEECCCCEEEEEEEEEEC AGNAFVPASNIPELTTTAGSADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGML CCCEEECCCCCCCEEECCCCCCCHHHCCCCCCEEECCCCCCEEEEEEEEEEECCCCEEEE NLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKADGSAYTQSYGDLVLSPEGTG EEEEEECCCCCCCCHHHCCHHHCCCCCCCCEEEEEEEEECCCCEEECCCCCEEECCCCCC LSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI CEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEEEEEEEEEEEECCCCCCC TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTC CCCEEEEEEEECCCCCEEEECCCEEEEEEHHHHHHHHCCEEECCCCCCCCCCEEEEEEEE TTPTEGDSYNVSVKVDDYSDVVATIPLSCP ECCCCCCCEEEEEEECCCCCEEEEEEECCC >Mature Secondary Structure MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDY CCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCHHEEEEEEEEEECCCCEEEEEEEEEEC AGNAFVPASNIPELTTTAGSADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGML CCCEEECCCCCCCEEECCCCCCCHHHCCCCCCEEECCCCCCEEEEEEEEEEECCCCEEEE NLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKADGSAYTQSYGDLVLSPEGTG EEEEEECCCCCCCCHHHCCHHHCCCCCCCCEEEEEEEEECCCCEEECCCCCEEECCCCCC LSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI CEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEEEEEEEEEEEECCCCCCC TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTC CCCEEEEEEEECCCCCEEEECCCEEEEEEHHHHHHHHCCEEECCCCCCCCCCEEEEEEEE TTPTEGDSYNVSVKVDDYSDVVATIPLSCP ECCCCCCCEEEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA