Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978309

Identifier: 156978309

GI number: 156978309

Start: 2187636

End: 2188628

Strand: Direct

Name: 156978309

Synonym: VIBHAR_07116

Alternate gene names: NA

Gene position: 2187636-2188628 (Clockwise)

Preceding gene: 156978308

Following gene: 156978310

Centisome position: 99.26

GC content: 46.73

Gene sequence:

>993_bases
GTGAACGCAGGTACTTATACCCTTGGTGCGAGCATAGGTGGCACTCAGTTGGCTAATGATATTGAGCTTACTTTTAATGC
CGTCATTGATTTATCACAGTCGACATTGCAAGCCGACATCACCACCATCGCGGCAGATGGCAGTAGTACTGCTCAATTGA
CCATCACGCTGAAAGACTACGCTGGCAATGCGTTTGTTCCAGCATCGAACATTCCTGAGCTCACGACTACAGCGGGCTCT
GCTGATATGACTGATTTAGTGAATACTAGCGATGGGGTGTACACAAGCAACATTAGCTCTAGTGTTGTTGGTGAGGTCAC
TGTTACTGCGACCTATGACTCAGGAACCGTTGGCATGCTAAACCTCACATTTGAGGCGTTACCGCCAAGTGATTCTCAGT
CTACCATCACAAGTGATATTTCTACCTTTGGTGTGGGTGGCGATCATAGTGCAGTTATCACGGTTGCTTTAAAGAAAGCT
GATGGCAGTGCTTACACACAAAGCTACGGTGATTTGGTGTTGAGCCCGGAAGGTACGGGGCTAAGCTATGATACTCCTGT
AGATAATGGTGATGGTACGTACACGGTGTCAGTTACTGCAGATACAGCTGGCAGTTATGTCGTGAGTGCTACCGTTGGGG
ATTTAGTACTGACAAATACGGTGTCGCTCACTGTTACTCAAGTCGATGTTGCTTTAAGTGGCGCGACTCCTGCCTCGATA
ACAGATTCAACAACGATAACTGTTACCTTACGAGACGGCTCTGGCAACATCATTACGCATGGAGGGCACAATATTAGTGT
TCGCTTTGCGAGTAGCATTATCAATCAATTGGGCATTGCAACATTCGGTGATGCTCAGTTCAATAGTCTAGACGGTACGT
ATGATGTAGCGGTTACATGTACTACTCCGACTGAGGGCGATAGTTATAACGTGTCGGTTAAGGTAGATGATTATAGTGAT
GTGGTGGCTACTATCCCGTTGAGTTGCCCTTAA

Upstream 100 bases:

>100_bases
CATCGTCTGCGGGGGAGATTTCATTCTCTGTGCCTAGTGGGGTAACGGAAGAATCAAAAACAGCAACGGTGATGGCTCGT
ATACGGCTGTCTTTACAACA

Downstream 100 bases:

>100_bases
TTAAATCAGCTACGCTTTGTTATTAAAAATGCCACTCAACACTGAGTGGCATTTTTATACGTCGTTTTTTCTAAGATTGT
TTAGACCGAAGTAACCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDYAGNAFVPASNIPELTTTAGS
ADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGMLNLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKA
DGSAYTQSYGDLVLSPEGTGLSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI
TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTCTTPTEGDSYNVSVKVDDYSD
VVATIPLSCP

Sequences:

>Translated_330_residues
MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDYAGNAFVPASNIPELTTTAGS
ADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGMLNLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKA
DGSAYTQSYGDLVLSPEGTGLSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI
TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTCTTPTEGDSYNVSVKVDDYSD
VVATIPLSCP
>Mature_330_residues
MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDYAGNAFVPASNIPELTTTAGS
ADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGMLNLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKA
DGSAYTQSYGDLVLSPEGTGLSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI
TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTCTTPTEGDSYNVSVKVDDYSD
VVATIPLSCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33495; Mature: 33495

Theoretical pI: Translated: 3.51; Mature: 3.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDY
CCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCHHEEEEEEEEEECCCCEEEEEEEEEEC
AGNAFVPASNIPELTTTAGSADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGML
CCCEEECCCCCCCEEECCCCCCCHHHCCCCCCEEECCCCCCEEEEEEEEEEECCCCEEEE
NLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKADGSAYTQSYGDLVLSPEGTG
EEEEEECCCCCCCCHHHCCHHHCCCCCCCCEEEEEEEEECCCCEEECCCCCEEECCCCCC
LSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI
CEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEEEEEEEEEEEECCCCCCC
TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTC
CCCEEEEEEEECCCCCEEEECCCEEEEEEHHHHHHHHCCEEECCCCCCCCCCEEEEEEEE
TTPTEGDSYNVSVKVDDYSDVVATIPLSCP
ECCCCCCCEEEEEEECCCCCEEEEEEECCC
>Mature Secondary Structure
MNAGTYTLGASIGGTQLANDIELTFNAVIDLSQSTLQADITTIAADGSSTAQLTITLKDY
CCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCHHEEEEEEEEEECCCCEEEEEEEEEEC
AGNAFVPASNIPELTTTAGSADMTDLVNTSDGVYTSNISSSVVGEVTVTATYDSGTVGML
CCCEEECCCCCCCEEECCCCCCCHHHCCCCCCEEECCCCCCEEEEEEEEEEECCCCEEEE
NLTFEALPPSDSQSTITSDISTFGVGGDHSAVITVALKKADGSAYTQSYGDLVLSPEGTG
EEEEEECCCCCCCCHHHCCHHHCCCCCCCCEEEEEEEEECCCCEEECCCCCEEECCCCCC
LSYDTPVDNGDGTYTVSVTADTAGSYVVSATVGDLVLTNTVSLTVTQVDVALSGATPASI
CEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEEEEEEEEEEEECCCCCCC
TDSTTITVTLRDGSGNIITHGGHNISVRFASSIINQLGIATFGDAQFNSLDGTYDVAVTC
CCCEEEEEEEECCCCCEEEECCCEEEEEEHHHHHHHHCCEEECCCCCCCCCCEEEEEEEE
TTPTEGDSYNVSVKVDDYSDVVATIPLSCP
ECCCCCCCEEEEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA