Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978302

Identifier: 156978302

GI number: 156978302

Start: 2179004

End: 2179711

Strand: Reverse

Name: 156978302

Synonym: VIBHAR_07109

Alternate gene names: NA

Gene position: 2179711-2179004 (Counterclockwise)

Preceding gene: 156978304

Following gene: 156978300

Centisome position: 98.9

GC content: 44.63

Gene sequence:

>708_bases
ATGAACAAAAGTTTGCTGACTAATATCCTTGCTATCGCCATGATGGGTGCGGGATATCACATTCAAAATGATTACCTTTG
GTACGCGGGTCTGTTCGCTTTTTCTGGAGCTATCACTAACTGGCTAGCCATTCATATGCTATTTGAAAAAGTACCCGGCT
TATACGGCTCAGGCGTCATTCCAGCACGTTTTGAAGAATTTAAATTGGCCATCAAAAACTTGATGATGGAGCAATTCTTT
ACTGAAGCAAACATCGACCGTTTCCTAAATAAAGAAATGGCAGGCGGCATGAAAATTAACCTTGAGCCTGTGATCGAGAA
AGTCGATTTAAACCCAGCCTTTGATTCATTGGTCGAAGTCATCGAAGGCTCTCAGTTTGGTGGCATGCTTGCAATGTTTG
GCGGTGCAGAAGCACTGCAACCCATGCGCCAACCGTTTGTGGAAAAAATGCAAGAGTCGATTATTGAGCTAAGCAAGAGC
GACACCATTAAGGAAGCACTAAAAGAGCAAATGGAATCGCCTGCAATGATGGATGAAATCAAGCAGAACATTGAAAGCAT
CATTGACCAGCGCCTGAGTGAGCTGACACCCGCTTTGGTTAAAGAAATCGTGCAGAAGATGATTAAAGAGCACCTTGGTT
GGCTCGTGGTTTGGGGCGGTGTGTTTGGTGGCCTTATCGGTGTACTAACCACATCCGTAAGCGCATAA

Upstream 100 bases:

>100_bases
CCAAATAAATCCAAGTGAGCTCAACCTAGCATCTACCTATCGCTTAGGTATAAAATCATGCCCACTTATTACTTCATCAA
TTCATAAATAATCGGTCACT

Downstream 100 bases:

>100_bases
AAAAGCTAATTGAAACTTGATATACAAAAGGAGCCTCATGGCTCCTTTTTTGTGTCTGATATCGACGTATCTCCACTCGT
ATTAACCGAGTAATTCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNKSLLTNILAIAMMGAGYHIQNDYLWYAGLFAFSGAITNWLAIHMLFEKVPGLYGSGVIPARFEEFKLAIKNLMMEQFF
TEANIDRFLNKEMAGGMKINLEPVIEKVDLNPAFDSLVEVIEGSQFGGMLAMFGGAEALQPMRQPFVEKMQESIIELSKS
DTIKEALKEQMESPAMMDEIKQNIESIIDQRLSELTPALVKEIVQKMIKEHLGWLVVWGGVFGGLIGVLTTSVSA

Sequences:

>Translated_235_residues
MNKSLLTNILAIAMMGAGYHIQNDYLWYAGLFAFSGAITNWLAIHMLFEKVPGLYGSGVIPARFEEFKLAIKNLMMEQFF
TEANIDRFLNKEMAGGMKINLEPVIEKVDLNPAFDSLVEVIEGSQFGGMLAMFGGAEALQPMRQPFVEKMQESIIELSKS
DTIKEALKEQMESPAMMDEIKQNIESIIDQRLSELTPALVKEIVQKMIKEHLGWLVVWGGVFGGLIGVLTTSVSA
>Mature_235_residues
MNKSLLTNILAIAMMGAGYHIQNDYLWYAGLFAFSGAITNWLAIHMLFEKVPGLYGSGVIPARFEEFKLAIKNLMMEQFF
TEANIDRFLNKEMAGGMKINLEPVIEKVDLNPAFDSLVEVIEGSQFGGMLAMFGGAEALQPMRQPFVEKMQESIIELSKS
DTIKEALKEQMESPAMMDEIKQNIESIIDQRLSELTPALVKEIVQKMIKEHLGWLVVWGGVFGGLIGVLTTSVSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26157; Mature: 26157

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSLLTNILAIAMMGAGYHIQNDYLWYAGLFAFSGAITNWLAIHMLFEKVPGLYGSGVI
CCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PARFEEFKLAIKNLMMEQFFTEANIDRFLNKEMAGGMKINLEPVIEKVDLNPAFDSLVEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHH
IEGSQFGGMLAMFGGAEALQPMRQPFVEKMQESIIELSKSDTIKEALKEQMESPAMMDEI
HCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
KQNIESIIDQRLSELTPALVKEIVQKMIKEHLGWLVVWGGVFGGLIGVLTTSVSA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKSLLTNILAIAMMGAGYHIQNDYLWYAGLFAFSGAITNWLAIHMLFEKVPGLYGSGVI
CCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PARFEEFKLAIKNLMMEQFFTEANIDRFLNKEMAGGMKINLEPVIEKVDLNPAFDSLVEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHH
IEGSQFGGMLAMFGGAEALQPMRQPFVEKMQESIIELSKSDTIKEALKEQMESPAMMDEI
HCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
KQNIESIIDQRLSELTPALVKEIVQKMIKEHLGWLVVWGGVFGGLIGVLTTSVSA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA