Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978272

Identifier: 156978272

GI number: 156978272

Start: 2144108

End: 2144419

Strand: Direct

Name: 156978272

Synonym: VIBHAR_07078

Alternate gene names: NA

Gene position: 2144108-2144419 (Clockwise)

Preceding gene: 156978271

Following gene: 156978274

Centisome position: 97.28

GC content: 44.55

Gene sequence:

>312_bases
ATGTCTCGTTTATCGATGCTGTTCCTTAGCGTTTTTGCCTTTTCAATTCAAGCAGTAGAAGTTGGAACCTTACCAGGTGA
ACTGGTTGTTCAATCAGGCACTGCCCAATATCAACTCCCAATCTCTGTACCTAAAGGGCGTGGTGGAAATTCTCCACAAC
TTTCTCTCGTTTATTCTAGTGGCGGAACTCCAAGTGGTGTAATTGGTTCTGGCTTTTCACTTACAGGGATGCCAACCATT
TCTCGTTGTGGCTCTCAGCAAACCATTGATAGTCAAGTTAGAGCCGTTCAATACCGGCGTTTTTCAAGGTAG

Upstream 100 bases:

>100_bases
GACTTTCTAGTTCAGAATTAGAAGCAAGTATTGCCAATCTTTACAATGAAATTGAACAACTAGAAAAATAATCCAGATTA
TATTTAAAAAGGAAAATAAA

Downstream 100 bases:

>100_bases
TTGTCATCATTCGCTTAGTTATTAAGCGGCTTTTCTTTCTGGATTTAGATGAACCTCACCAACGGGGTCACAGTTCCTAA
TTTTGCCTGACCAACGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSRLSMLFLSVFAFSIQAVEVGTLPGELVVQSGTAQYQLPISVPKGRGGNSPQLSLVYSSGGTPSGVIGSGFSLTGMPTI
SRCGSQQTIDSQVRAVQYRRFSR

Sequences:

>Translated_103_residues
MSRLSMLFLSVFAFSIQAVEVGTLPGELVVQSGTAQYQLPISVPKGRGGNSPQLSLVYSSGGTPSGVIGSGFSLTGMPTI
SRCGSQQTIDSQVRAVQYRRFSR
>Mature_102_residues
SRLSMLFLSVFAFSIQAVEVGTLPGELVVQSGTAQYQLPISVPKGRGGNSPQLSLVYSSGGTPSGVIGSGFSLTGMPTIS
RCGSQQTIDSQVRAVQYRRFSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10874; Mature: 10742

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLSMLFLSVFAFSIQAVEVGTLPGELVVQSGTAQYQLPISVPKGRGGNSPQLSLVYSS
CCHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECC
GGTPSGVIGSGFSLTGMPTISRCGSQQTIDSQVRAVQYRRFSR
CCCCCCEECCCEEECCCCCHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRLSMLFLSVFAFSIQAVEVGTLPGELVVQSGTAQYQLPISVPKGRGGNSPQLSLVYSS
CHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECC
GGTPSGVIGSGFSLTGMPTISRCGSQQTIDSQVRAVQYRRFSR
CCCCCCEECCCEEECCCCCHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA