| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978268
Identifier: 156978268
GI number: 156978268
Start: 2142597
End: 2143073
Strand: Reverse
Name: 156978268
Synonym: VIBHAR_07074
Alternate gene names: NA
Gene position: 2143073-2142597 (Counterclockwise)
Preceding gene: 156978269
Following gene: 156978265
Centisome position: 97.23
GC content: 40.88
Gene sequence:
>477_bases TTGAATGATTTTATAAATATCAAGCTTGTTTTATATAACCCAGTCACATTTTTGATATTTAACTTTTTGCTTAGAAACAA AGTGCCTGTACGCTTGCGCCTTGATAACAAAGTAAATTTGGCCAACGAAATGAAAACTCGAGCTTATTCTGTCCACACTC TTCTAGCCGCGCTGGTAATGGTAATTCCACTAGATTCTCGAGCAGAGGTTTCTACTGGTTTGGTAACAAAAATGGAATAT GGCCCTGTTTACAGAGGTTTAGTGTTTGTCGATCTAGAAGGGGAAACAAATACAGAATGTGCAACTAACCGAAACGGCTT CGATTACGCTTTTGACGCTTCAACCGAGGCTGGAAAACTCGTTTTTAGCTCTTTGTTGGCAGCCCAAAGGAGTGGTGTAG AGGTAACGTTGTCAGGCGAGGGTACTTGTACCTTGAATACGACCATTGAGGATCTTCGCTGGATGCAAAGCAAATAA
Upstream 100 bases:
>100_bases AGCTTCTTCTCACTAAAGCCATTGATCAAGCAAATGTATGAAAATCATAAATAACTCAATGGTTACATTTCAATACACAT TCACAAAAACATGAACAACA
Downstream 100 bases:
>100_bases AACCTCCAGAAAGTAAGTATCCCCCGCTCACCTTAGGAGAACTATTTTGAAACGAATTTTTTTAATCACTATGATTATAC CTCTTTTCTTTTCAAGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNDFINIKLVLYNPVTFLIFNFLLRNKVPVRLRLDNKVNLANEMKTRAYSVHTLLAALVMVIPLDSRAEVSTGLVTKMEY GPVYRGLVFVDLEGETNTECATNRNGFDYAFDASTEAGKLVFSSLLAAQRSGVEVTLSGEGTCTLNTTIEDLRWMQSK
Sequences:
>Translated_158_residues MNDFINIKLVLYNPVTFLIFNFLLRNKVPVRLRLDNKVNLANEMKTRAYSVHTLLAALVMVIPLDSRAEVSTGLVTKMEY GPVYRGLVFVDLEGETNTECATNRNGFDYAFDASTEAGKLVFSSLLAAQRSGVEVTLSGEGTCTLNTTIEDLRWMQSK >Mature_158_residues MNDFINIKLVLYNPVTFLIFNFLLRNKVPVRLRLDNKVNLANEMKTRAYSVHTLLAALVMVIPLDSRAEVSTGLVTKMEY GPVYRGLVFVDLEGETNTECATNRNGFDYAFDASTEAGKLVFSSLLAAQRSGVEVTLSGEGTCTLNTTIEDLRWMQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17634; Mature: 17634
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDFINIKLVLYNPVTFLIFNFLLRNKVPVRLRLDNKVNLANEMKTRAYSVHTLLAALVM CCCEEEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH VIPLDSRAEVSTGLVTKMEYGPVYRGLVFVDLEGETNTECATNRNGFDYAFDASTEAGKL HHCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHH VFSSLLAAQRSGVEVTLSGEGTCTLNTTIEDLRWMQSK HHHHHHHHHCCCCEEEECCCCEEEECCCHHHHHHHCCC >Mature Secondary Structure MNDFINIKLVLYNPVTFLIFNFLLRNKVPVRLRLDNKVNLANEMKTRAYSVHTLLAALVM CCCEEEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH VIPLDSRAEVSTGLVTKMEYGPVYRGLVFVDLEGETNTECATNRNGFDYAFDASTEAGKL HHCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHH VFSSLLAAQRSGVEVTLSGEGTCTLNTTIEDLRWMQSK HHHHHHHHHCCCCEEEECCCCEEEECCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA