| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978264
Identifier: 156978264
GI number: 156978264
Start: 2140734
End: 2141168
Strand: Reverse
Name: 156978264
Synonym: VIBHAR_07070
Alternate gene names: NA
Gene position: 2141168-2140734 (Counterclockwise)
Preceding gene: 156978265
Following gene: 156978262
Centisome position: 97.15
GC content: 38.16
Gene sequence:
>435_bases ATGGCGACAACGTACCAAAAAGTTGCAGTTCGTTTAAATCGTGGCAAGAGGTATTTATTCGATATGTCAATTATTAGTCG AAGTATTTATTCGTTTAAATACATTATATTGCTAATGTTATTCTCTGGCTTTTCACAGGCAGCTTGGCTTAGTACCTCTG GCAAAGTTGAAAGCATCGTAACCTATTCAAAAACAAACACTGTTTTAGTGGCACTTACATCGTCAGGACAAGAAGTTGAA GAATGCTCGAACAAAACCATTTTTGCGATCAGCAAGGACTTGGTACCAGAAGCCAGAAATAGGATGTTTTCAATGTTGTT AGCATCCGAAGCATCAGATACCGACATAACCGTTTCATATCTTAATTCCGGAGGCTGTGAGCCTTGGGGTTCAAGTCCAA ACGTATATAGAAAAATCGTAAGAATGACTAAATAG
Upstream 100 bases:
>100_bases GAGCCAAACCGTGTAATGAGCCCAGACACATGCAAAGCTGTCTTTTCAATTTTTCTAAGCGCTCGCTCTACAGGGGAAAC AATAAACCGGGTGCATTTTG
Downstream 100 bases:
>100_bases AAATAGGTACGACTATGAATAAATTAATCGCTGTATGCTTAGTATTATTATCGTTTAATGTTCATGCCTCAAGATATACG TGTTCAGGAAAAGTTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIVTYSKTNTVLVALTSSGQEVE ECSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSYLNSGGCEPWGSSPNVYRKIVRMTK
Sequences:
>Translated_144_residues MATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIVTYSKTNTVLVALTSSGQEVE ECSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSYLNSGGCEPWGSSPNVYRKIVRMTK >Mature_143_residues ATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIVTYSKTNTVLVALTSSGQEVEE CSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSYLNSGGCEPWGSSPNVYRKIVRMTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16097; Mature: 15966
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIV CCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE TYSKTNTVLVALTSSGQEVEECSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSY EEECCCEEEEEEECCCCHHHHHCCCEEEEEEHHHCHHHHHHHHHHHHHCCCCCCCEEEEE LNSGGCEPWGSSPNVYRKIVRMTK ECCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure ATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIV CCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE TYSKTNTVLVALTSSGQEVEECSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSY EEECCCEEEEEEECCCCHHHHHCCCEEEEEEHHHCHHHHHHHHHHHHHCCCCCCCEEEEE LNSGGCEPWGSSPNVYRKIVRMTK ECCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA