Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156978264

Identifier: 156978264

GI number: 156978264

Start: 2140734

End: 2141168

Strand: Reverse

Name: 156978264

Synonym: VIBHAR_07070

Alternate gene names: NA

Gene position: 2141168-2140734 (Counterclockwise)

Preceding gene: 156978265

Following gene: 156978262

Centisome position: 97.15

GC content: 38.16

Gene sequence:

>435_bases
ATGGCGACAACGTACCAAAAAGTTGCAGTTCGTTTAAATCGTGGCAAGAGGTATTTATTCGATATGTCAATTATTAGTCG
AAGTATTTATTCGTTTAAATACATTATATTGCTAATGTTATTCTCTGGCTTTTCACAGGCAGCTTGGCTTAGTACCTCTG
GCAAAGTTGAAAGCATCGTAACCTATTCAAAAACAAACACTGTTTTAGTGGCACTTACATCGTCAGGACAAGAAGTTGAA
GAATGCTCGAACAAAACCATTTTTGCGATCAGCAAGGACTTGGTACCAGAAGCCAGAAATAGGATGTTTTCAATGTTGTT
AGCATCCGAAGCATCAGATACCGACATAACCGTTTCATATCTTAATTCCGGAGGCTGTGAGCCTTGGGGTTCAAGTCCAA
ACGTATATAGAAAAATCGTAAGAATGACTAAATAG

Upstream 100 bases:

>100_bases
GAGCCAAACCGTGTAATGAGCCCAGACACATGCAAAGCTGTCTTTTCAATTTTTCTAAGCGCTCGCTCTACAGGGGAAAC
AATAAACCGGGTGCATTTTG

Downstream 100 bases:

>100_bases
AAATAGGTACGACTATGAATAAATTAATCGCTGTATGCTTAGTATTATTATCGTTTAATGTTCATGCCTCAAGATATACG
TGTTCAGGAAAAGTTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIVTYSKTNTVLVALTSSGQEVE
ECSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSYLNSGGCEPWGSSPNVYRKIVRMTK

Sequences:

>Translated_144_residues
MATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIVTYSKTNTVLVALTSSGQEVE
ECSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSYLNSGGCEPWGSSPNVYRKIVRMTK
>Mature_143_residues
ATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIVTYSKTNTVLVALTSSGQEVEE
CSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSYLNSGGCEPWGSSPNVYRKIVRMTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16097; Mature: 15966

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIV
CCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE
TYSKTNTVLVALTSSGQEVEECSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSY
EEECCCEEEEEEECCCCHHHHHCCCEEEEEEHHHCHHHHHHHHHHHHHCCCCCCCEEEEE
LNSGGCEPWGSSPNVYRKIVRMTK
ECCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ATTYQKVAVRLNRGKRYLFDMSIISRSIYSFKYIILLMLFSGFSQAAWLSTSGKVESIV
CCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE
TYSKTNTVLVALTSSGQEVEECSNKTIFAISKDLVPEARNRMFSMLLASEASDTDITVSY
EEECCCEEEEEEECCCCHHHHHCCCEEEEEEHHHCHHHHHHHHHHHHHCCCCCCCEEEEE
LNSGGCEPWGSSPNVYRKIVRMTK
ECCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA