| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978257
Identifier: 156978257
GI number: 156978257
Start: 2137995
End: 2138354
Strand: Reverse
Name: 156978257
Synonym: VIBHAR_07063
Alternate gene names: NA
Gene position: 2138354-2137995 (Counterclockwise)
Preceding gene: 156978258
Following gene: 156978256
Centisome position: 97.02
GC content: 38.61
Gene sequence:
>360_bases ATGTCAGTTACCTGTCTGAATAACTTTGAGGTACTTCTTATGTTACGGATCATCATCTTATCCCTCTCTCTGGCCACATT TTCTACGTTTGCTTCCGATGTTACAGTATTTGGGAAAATAAAGTGGATAAACAACTGGCAAGGTCATTCGGGCTTCTTAG TTGCTCTAGAGAATATGACACCCACAAAAGGAATATGTAAACGTAATGACCAATATATACTCCCTCAAAATCATCAATTC GCTAAGGAAAACTTTTCTATGCTGTTATCTTCTAGAATAGCCGATAAGCCCGTTACTTTAGTAATCCGCTCAGGCGAATG TTTAGAGGGATTCCCCAAAATAGCTCACATCCGTATTTAA
Upstream 100 bases:
>100_bases TACAGCATGGCCTTGACTGCATTTACAGCAAGGATCCCCATTGGCTTTTGGATAACCAGTTGCGGTTATAGCCCATGTGG AGATACAGTCCCTGTCGCTT
Downstream 100 bases:
>100_bases ATCCTTTAGAGGAGAGCTATATTTAGCTCTCTTCCAACTATATATCACGAACTCCACAATAACAGCTTTAACAACTAATC TAAGTAAACTCCAATAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSVTCLNNFEVLLMLRIIILSLSLATFSTFASDVTVFGKIKWINNWQGHSGFLVALENMTPTKGICKRNDQYILPQNHQF AKENFSMLLSSRIADKPVTLVIRSGECLEGFPKIAHIRI
Sequences:
>Translated_119_residues MSVTCLNNFEVLLMLRIIILSLSLATFSTFASDVTVFGKIKWINNWQGHSGFLVALENMTPTKGICKRNDQYILPQNHQF AKENFSMLLSSRIADKPVTLVIRSGECLEGFPKIAHIRI >Mature_118_residues SVTCLNNFEVLLMLRIIILSLSLATFSTFASDVTVFGKIKWINNWQGHSGFLVALENMTPTKGICKRNDQYILPQNHQFA KENFSMLLSSRIADKPVTLVIRSGECLEGFPKIAHIRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13443; Mature: 13312
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTCLNNFEVLLMLRIIILSLSLATFSTFASDVTVFGKIKWINNWQGHSGFLVALENMT CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCEEEEEECCCC PTKGICKRNDQYILPQNHQFAKENFSMLLSSRIADKPVTLVIRSGECLEGFPKIAHIRI CCCCHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEC >Mature Secondary Structure SVTCLNNFEVLLMLRIIILSLSLATFSTFASDVTVFGKIKWINNWQGHSGFLVALENMT EEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCEEEEEECCCC PTKGICKRNDQYILPQNHQFAKENFSMLLSSRIADKPVTLVIRSGECLEGFPKIAHIRI CCCCHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA