Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978225

Identifier: 156978225

GI number: 156978225

Start: 2105944

End: 2106609

Strand: Reverse

Name: 156978225

Synonym: VIBHAR_07030

Alternate gene names: NA

Gene position: 2106609-2105944 (Counterclockwise)

Preceding gene: 156978226

Following gene: 156978224

Centisome position: 95.58

GC content: 48.35

Gene sequence:

>666_bases
ATGGTTTCTCAATCTCGCTCAATCAAAGCTCTTAAACTGGCAAGTACGTTTATCGCCGCATTTGCACTCAGCAGCAATCT
GGCTCTGGCTAATCCAAGCGAGCGCACACTCAGTCAATTCAACCAAGCAGCGCAGGGTGACTCCGGCTTAGTTGATACCG
TTTACGGCGAATTATCCAAACAACTCGAAGAGCAGGGCGCAACGCCAGTGACCTTGGTGTATTTAGGCAGTGCGGAGACG
TTGCAAGGTCGTGAAGCGTTTATGCCTTGGAACAAGATGAAGTTCACCGAGCGGGGTCTTGCCACAATCCAAAAAGGTTT
GGATTTAATGGCGAATCAGCCATTACCACTGCAAGAACAACAACGCTTACAAGGCTTGCCGGAATACCAGCTAGCTACCG
CCATGGCAGCCACTACGTTTACCTCTCTGCCAGACATGTTCAATCATTTTGAGCGTGGCTACGAGCTGTACCTTTCTCTG
CTTGATGAACCGAGTTTTAGCCAACAACCTTTTGCGGCTACTTCATGGATTTACCGTTATGCCATTGAAGCAGCACTACG
AGCTGAAGATGTTCAACAAGCCAAAACATGGTTAGCGCAAATGGAGCAGTTAGGTGACAGCAATCTAGAAACGCAAACCG
CGAAAGCGCTACTAGCGAAATATTAG

Upstream 100 bases:

>100_bases
TCACTCCGCATAACTGCCATTGGTCGCATGTAAAAGCAGCGTGCGATCGTCTCCCTTAATCTGAAACCATCAAATCACGT
TCAACTAAGGACAGTACAGG

Downstream 100 bases:

>100_bases
GGAGGCGTCATGATCGTTTTTAATCAACTTAGTCGCGATTACGCCCTTGGCAGCCAAACGGTGCGTGCCTTGCGAGAAGT
GTCTGGTGAAGTGTTTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MVSQSRSIKALKLASTFIAAFALSSNLALANPSERTLSQFNQAAQGDSGLVDTVYGELSKQLEEQGATPVTLVYLGSAET
LQGREAFMPWNKMKFTERGLATIQKGLDLMANQPLPLQEQQRLQGLPEYQLATAMAATTFTSLPDMFNHFERGYELYLSL
LDEPSFSQQPFAATSWIYRYAIEAALRAEDVQQAKTWLAQMEQLGDSNLETQTAKALLAKY

Sequences:

>Translated_221_residues
MVSQSRSIKALKLASTFIAAFALSSNLALANPSERTLSQFNQAAQGDSGLVDTVYGELSKQLEEQGATPVTLVYLGSAET
LQGREAFMPWNKMKFTERGLATIQKGLDLMANQPLPLQEQQRLQGLPEYQLATAMAATTFTSLPDMFNHFERGYELYLSL
LDEPSFSQQPFAATSWIYRYAIEAALRAEDVQQAKTWLAQMEQLGDSNLETQTAKALLAKY
>Mature_221_residues
MVSQSRSIKALKLASTFIAAFALSSNLALANPSERTLSQFNQAAQGDSGLVDTVYGELSKQLEEQGATPVTLVYLGSAET
LQGREAFMPWNKMKFTERGLATIQKGLDLMANQPLPLQEQQRLQGLPEYQLATAMAATTFTSLPDMFNHFERGYELYLSL
LDEPSFSQQPFAATSWIYRYAIEAALRAEDVQQAKTWLAQMEQLGDSNLETQTAKALLAKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24503; Mature: 24503

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSQSRSIKALKLASTFIAAFALSSNLALANPSERTLSQFNQAAQGDSGLVDTVYGELSK
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
QLEEQGATPVTLVYLGSAETLQGREAFMPWNKMKFTERGLATIQKGLDLMANQPLPLQEQ
HHHHCCCCCEEEEEECCCHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QRLQGLPEYQLATAMAATTFTSLPDMFNHFERGYELYLSLLDEPSFSQQPFAATSWIYRY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AIEAALRAEDVQQAKTWLAQMEQLGDSNLETQTAKALLAKY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MVSQSRSIKALKLASTFIAAFALSSNLALANPSERTLSQFNQAAQGDSGLVDTVYGELSK
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
QLEEQGATPVTLVYLGSAETLQGREAFMPWNKMKFTERGLATIQKGLDLMANQPLPLQEQ
HHHHCCCCCEEEEEECCCHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QRLQGLPEYQLATAMAATTFTSLPDMFNHFERGYELYLSLLDEPSFSQQPFAATSWIYRY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AIEAALRAEDVQQAKTWLAQMEQLGDSNLETQTAKALLAKY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA