Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978221

Identifier: 156978221

GI number: 156978221

Start: 2101828

End: 2103156

Strand: Reverse

Name: 156978221

Synonym: VIBHAR_07026

Alternate gene names: NA

Gene position: 2103156-2101828 (Counterclockwise)

Preceding gene: 156978222

Following gene: 156978220

Centisome position: 95.42

GC content: 49.36

Gene sequence:

>1329_bases
ATGAAATCGCACCAGTCTAACCTTAACAAAAGCACCAGTTTGTTGCTTGCTGCCTCATTGTGTGTGGGCGCGTCAGCCCC
TGCTTTTGCCAATGATGAGCTGAGTTTTGAGTGGGATTGGGCTGTAAGTTACGAAACTGCCAAGCAGCGTGACAGCGCAT
TTATGCAGGCGCAGGGCAGTTCTCGTGATTCACTTAATGCACTGTTGGATGTGCAGGTGAATTATCAGAACTTCAGTGGT
TTGTTCGCTCTGTATAGCCAAGGTTTGTACCTCAATCAACAAGGAAAGAGTGATTTGTGGAGTGAAGCTGATAACCAATT
GTTGATTAGAGAGCTGGCTTGGCTAGGGGAGTGGCAAGTCGGTGATACCACACTTGATGTGAGTTTGGGTAAGTTGTGCG
TGGATTGGGGCGTGGGTTATGGCTACCGACCTTTGGATCTGTTTAAGCCTTATCGACAAAACCCGGTTGGCTTAGTCGCA
GAAGAGGGCGCGGGCGTGTTTTCACTTTCACACTACGATATGGCCGGCGAATGGACCGTCATTGCGACCGATTCAAGCTG
GGGGCAACAAGACCAAAGTGCACTTGATCAAGCCGCAGAGCAACAAGGTATTGGTATTCGCCGTTATGCGCTGGTGGGTG
ACACCGAGTATCAACTTATTGGTTATTACGATGATGTGCGCCGAGGTTTACTCGGAGCCAGTGCCATTGCCGTGTGGGAT
GAATCCATCGCCATGCACGGCTCAATGCTGTGGCAAAAGCAAAGTGTCGGCTATCAGTTTCAGCAGGATGATCTTTACCA
ACCCGTTTCGGTTGAGGAGCAGGGCAGCGCATTCCAAGCCTTAGTTGGACTGAACTGGGCAAACCAAGCCGGACACAACG
TGATTGCGGAATATTGGTACGACAGCCGAGCATGGTCGAAAAGCGAATGGCAACAAGCAATAGAGCGTGGCGAATTTCTC
TCTCAGAACTCTGATCCTAATGTACCTCTACTTGCGACAAGCTACGCCCAAGGGTTTCAGCATGCCAATATCGTTCAGCA
TAACGTAATGCTGCACTGGAGTTGGGATTTAGAAGCATGGGCTGCATGGAACGGTAAAGCGGATATGGGCTGGCTAAGTG
ATGTAACCCCCACGTTGGATGTCATGCTGTCGCCGCAAGATGGCGGTGTGATCGTCACGCAGTGGCTTAACTACCGATGG
ATTGATACTGGCGATCAAAGTGTAGAAGTGGAAGTTGCCGCACGCTTTTTAACCGGAGACGACCAATCTGCTTACGCACA
AATCAATGATAAGCATATGATTGTATTTAACATCAAAGGGAAATTCTAA

Upstream 100 bases:

>100_bases
CAATAAGTTCTACAACCCAAGCTATCTGCCTAAAGCCAATACGACTCAGCTTTAGCCTGAGCTTCGTAAATAGAACCATG
AAAACGAGCAAGGAAGTCAC

Downstream 100 bases:

>100_bases
ATGTGTTCAGCAAAATCAGTGGTGAAAAGTGGATGGCCGCGTAGCTTATTAGTGACCACGGCATTTTGTCTCTTTATCGC
AGCAATGACGCTCTCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MKSHQSNLNKSTSLLLAASLCVGASAPAFANDELSFEWDWAVSYETAKQRDSAFMQAQGSSRDSLNALLDVQVNYQNFSG
LFALYSQGLYLNQQGKSDLWSEADNQLLIRELAWLGEWQVGDTTLDVSLGKLCVDWGVGYGYRPLDLFKPYRQNPVGLVA
EEGAGVFSLSHYDMAGEWTVIATDSSWGQQDQSALDQAAEQQGIGIRRYALVGDTEYQLIGYYDDVRRGLLGASAIAVWD
ESIAMHGSMLWQKQSVGYQFQQDDLYQPVSVEEQGSAFQALVGLNWANQAGHNVIAEYWYDSRAWSKSEWQQAIERGEFL
SQNSDPNVPLLATSYAQGFQHANIVQHNVMLHWSWDLEAWAAWNGKADMGWLSDVTPTLDVMLSPQDGGVIVTQWLNYRW
IDTGDQSVEVEVAARFLTGDDQSAYAQINDKHMIVFNIKGKF

Sequences:

>Translated_442_residues
MKSHQSNLNKSTSLLLAASLCVGASAPAFANDELSFEWDWAVSYETAKQRDSAFMQAQGSSRDSLNALLDVQVNYQNFSG
LFALYSQGLYLNQQGKSDLWSEADNQLLIRELAWLGEWQVGDTTLDVSLGKLCVDWGVGYGYRPLDLFKPYRQNPVGLVA
EEGAGVFSLSHYDMAGEWTVIATDSSWGQQDQSALDQAAEQQGIGIRRYALVGDTEYQLIGYYDDVRRGLLGASAIAVWD
ESIAMHGSMLWQKQSVGYQFQQDDLYQPVSVEEQGSAFQALVGLNWANQAGHNVIAEYWYDSRAWSKSEWQQAIERGEFL
SQNSDPNVPLLATSYAQGFQHANIVQHNVMLHWSWDLEAWAAWNGKADMGWLSDVTPTLDVMLSPQDGGVIVTQWLNYRW
IDTGDQSVEVEVAARFLTGDDQSAYAQINDKHMIVFNIKGKF
>Mature_442_residues
MKSHQSNLNKSTSLLLAASLCVGASAPAFANDELSFEWDWAVSYETAKQRDSAFMQAQGSSRDSLNALLDVQVNYQNFSG
LFALYSQGLYLNQQGKSDLWSEADNQLLIRELAWLGEWQVGDTTLDVSLGKLCVDWGVGYGYRPLDLFKPYRQNPVGLVA
EEGAGVFSLSHYDMAGEWTVIATDSSWGQQDQSALDQAAEQQGIGIRRYALVGDTEYQLIGYYDDVRRGLLGASAIAVWD
ESIAMHGSMLWQKQSVGYQFQQDDLYQPVSVEEQGSAFQALVGLNWANQAGHNVIAEYWYDSRAWSKSEWQQAIERGEFL
SQNSDPNVPLLATSYAQGFQHANIVQHNVMLHWSWDLEAWAAWNGKADMGWLSDVTPTLDVMLSPQDGGVIVTQWLNYRW
IDTGDQSVEVEVAARFLTGDDQSAYAQINDKHMIVFNIKGKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49446; Mature: 49446

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSHQSNLNKSTSLLLAASLCVGASAPAFANDELSFEWDWAVSYETAKQRDSAFMQAQGS
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCC
SRDSLNALLDVQVNYQNFSGLFALYSQGLYLNQQGKSDLWSEADNQLLIRELAWLGEWQV
CCCCCEEEEEEEEECCCHHHHHHHHHCCEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCC
GDTTLDVSLGKLCVDWGVGYGYRPLDLFKPYRQNPVGLVAEEGAGVFSLSHYDMAGEWTV
CCEEEEEEHHHHHEECCCCCCCCCHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCEEE
IATDSSWGQQDQSALDQAAEQQGIGIRRYALVGDTEYQLIGYYDDVRRGLLGASAIAVWD
EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCEEEEEC
ESIAMHGSMLWQKQSVGYQFQQDDLYQPVSVEEQGSAFQALVGLNWANQAGHNVIAEYWY
HHHHHHHHHHEEHHCCCCEECCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCEEEEEEC
DSRAWSKSEWQQAIERGEFLSQNSDPNVPLLATSYAQGFQHANIVQHNVMLHWSWDLEAW
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCCCEEEEEEEEEEECCCEEE
AAWNGKADMGWLSDVTPTLDVMLSPQDGGVIVTQWLNYRWIDTGDQSVEVEVAARFLTGD
EEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEEECCCCCEEEEEEEEEEECCC
DQSAYAQINDKHMIVFNIKGKF
CCCEEEEECCCEEEEEEECCCC
>Mature Secondary Structure
MKSHQSNLNKSTSLLLAASLCVGASAPAFANDELSFEWDWAVSYETAKQRDSAFMQAQGS
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCC
SRDSLNALLDVQVNYQNFSGLFALYSQGLYLNQQGKSDLWSEADNQLLIRELAWLGEWQV
CCCCCEEEEEEEEECCCHHHHHHHHHCCEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCC
GDTTLDVSLGKLCVDWGVGYGYRPLDLFKPYRQNPVGLVAEEGAGVFSLSHYDMAGEWTV
CCEEEEEEHHHHHEECCCCCCCCCHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCEEE
IATDSSWGQQDQSALDQAAEQQGIGIRRYALVGDTEYQLIGYYDDVRRGLLGASAIAVWD
EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCEEEEEC
ESIAMHGSMLWQKQSVGYQFQQDDLYQPVSVEEQGSAFQALVGLNWANQAGHNVIAEYWY
HHHHHHHHHHEEHHCCCCEECCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCEEEEEEC
DSRAWSKSEWQQAIERGEFLSQNSDPNVPLLATSYAQGFQHANIVQHNVMLHWSWDLEAW
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCCCEEEEEEEEEEECCCEEE
AAWNGKADMGWLSDVTPTLDVMLSPQDGGVIVTQWLNYRWIDTGDQSVEVEVAARFLTGD
EEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEEECCCCCEEEEEEEEEEECCC
DQSAYAQINDKHMIVFNIKGKF
CCCEEEEECCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA