| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156978216
Identifier: 156978216
GI number: 156978216
Start: 2097017
End: 2097403
Strand: Direct
Name: 156978216
Synonym: VIBHAR_07021
Alternate gene names: NA
Gene position: 2097017-2097403 (Clockwise)
Preceding gene: 156978214
Following gene: 156978217
Centisome position: 95.15
GC content: 50.39
Gene sequence:
>387_bases ATGACCAAACTGACCGTATTTTACGATGGCACTTGCCCCTTATGCGCCAAAGAGATGAAAGCGCTAAAACAACGTGATGC CAAGCAGCAAATCAAAACCGTCGACATTTACAGCAAGGCGTTCGCCGACTATCCGCAAATCGATCCTGAGCAAGCCAATA CCATTTTGCACGCCCTCAACGAGAAAGGTGAGTTGCTGCTTGGGTTGGATGTCACTCATCGAGCGTGGCAACTGGTTGGT CGCGGCTGGATGTACGCACCGCTGCGTTGGCGCATGGTCAAACCCCTTGCAGATTGGCTATACCTCAAGTTTGCCAAAAA TCGCTACCGCGTCTCTTATTGGTTAACGGGCACTTCTCGCTGCAATAATGACTCGTGTTCACGTTAA
Upstream 100 bases:
>100_bases GCAACGTCCGAGATAATCGGCTGCATTACTTGCAAGACAATGAACTAAAAGAAAAATAATCGCGTAAAAGGGATAAGAAC CGCCAATAATGAGCTCAATC
Downstream 100 bases:
>100_bases TTGTGATCCTGCTTTAAAATGCTACGACCTTAGTCTAGATTTATAAATTTCCAGTACTTCTGATTGATTAACTCGGTTAA TCTCTAAGCATTACAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Potential Redox Protein; Thiol-Disulfide Oxidoreductase DCC; Redox Protein; Inhibitor
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTKLTVFYDGTCPLCAKEMKALKQRDAKQQIKTVDIYSKAFADYPQIDPEQANTILHALNEKGELLLGLDVTHRAWQLVG RGWMYAPLRWRMVKPLADWLYLKFAKNRYRVSYWLTGTSRCNNDSCSR
Sequences:
>Translated_128_residues MTKLTVFYDGTCPLCAKEMKALKQRDAKQQIKTVDIYSKAFADYPQIDPEQANTILHALNEKGELLLGLDVTHRAWQLVG RGWMYAPLRWRMVKPLADWLYLKFAKNRYRVSYWLTGTSRCNNDSCSR >Mature_127_residues TKLTVFYDGTCPLCAKEMKALKQRDAKQQIKTVDIYSKAFADYPQIDPEQANTILHALNEKGELLLGLDVTHRAWQLVGR GWMYAPLRWRMVKPLADWLYLKFAKNRYRVSYWLTGTSRCNNDSCSR
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14935; Mature: 14804
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTVFYDGTCPLCAKEMKALKQRDAKQQIKTVDIYSKAFADYPQIDPEQANTILHALN CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC EKGELLLGLDVTHRAWQLVGRGWMYAPLRWRMVKPLADWLYLKFAKNRYRVSYWLTGTSR CCCCEEEEECCHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCC CNNDSCSR CCCCCCCC >Mature Secondary Structure TKLTVFYDGTCPLCAKEMKALKQRDAKQQIKTVDIYSKAFADYPQIDPEQANTILHALN CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC EKGELLLGLDVTHRAWQLVGRGWMYAPLRWRMVKPLADWLYLKFAKNRYRVSYWLTGTSR CCCCEEEEECCHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCC CNNDSCSR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA