BacMap

Definition	Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession	NC_009784
Length	2,204,018

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 156978211

GI number: 156978211

Start: 2093865

End: 2094635

Strand: Reverse

Name: fabG [H]

Synonym: VIBHAR_07016

Alternate gene names: 156978211

Gene position: 2094635-2093865 (Counterclockwise)

Preceding gene: 156978212

Following gene: 156978210

Centisome position: 95.04

GC content: 45.65

Gene sequence:

>771_bases
ATGTTCAACACATCTTCAATTGCACTTATCGTAGGCGGCTCATCGGGTATGGGTAAAGCGACAGCAGAACGACTTCTTAA
AGCTGGTGTACCTGTCATGATTCTTTCACACGATAAAAACAACCTCGCTGAAGCAAAACAGGATTTAGAAAGTGTGACCA
AAGGTCAGGTAGAGACCGCTCAAGTTGACCTGTATGACTCAAGTGCAGTGAAAAGCTTCATCGAACAATTGAATGCTGAA
AAACGTCATATTGGTTACTTGGTTAATGCTGCTGGCTTCTTCAAACCAGTTGATTTCCTTGACCACTCAGAGCGTGATTA
CGACCTACAACTAGACATGAACCGCGCGTTTTTCTTCATCACTCAGGCCGTGGCGAAAAACATGAAAGCGCACGGTGGCG
GTGCGATCGTAAATATCGGTTCTATGTGGGCTCACCAAGCAATTAAAGCAACACCATCATCAGCGTATTCAATGCAAAAA
GCGGGTCTTCATGCTCTGACGAAAAACCTAGCAATCGAACTTGGTGATCACGGTGTACGCGTAAATGCTGTAGCACCAGC
TGTTGTGATGTCGACGATTTACAAATCATTTATCGCGGAAGAAGAAATTGAATCAGCACTACAAGGCTTCAATGACTTCC
ACCCAATCGGCCGTATCGGTTCAACAGAAGATGTGGCGGATGCGATTGAGTACTTACTGTCAGACAAATCATCTTGGGTA
ACTGGCACTGTGCTTAACGTCGACGGCGGCGTAATGGCTGGCCGTAACTAA

Upstream 100 bases:

>100_bases
CAACCACTGACGAGGAGCTGGGCCCCAAACCACCTCCTTTTTTAATAAAAACACCACCTACTTACTAGTAGGTAGGTGAA
TAAGAGAAAGGAAACGTATT

Downstream 100 bases:

>100_bases
CCTCACTAAACGTACAAATTGGGGCCTTTCACTCCCCCCCTAAAGACCCCAATTAAAAATTCAGTAGTAAACACGACATC
AAATAATAACAAGGACATAT

Product: oxidoreductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFNTSSIALIVGGSSGMGKATAERLLKAGVPVMILSHDKNNLAEAKQDLESVTKGQVETAQVDLYDSSAVKSFIEQLNAE
KRHIGYLVNAAGFFKPVDFLDHSERDYDLQLDMNRAFFFITQAVAKNMKAHGGGAIVNIGSMWAHQAIKATPSSAYSMQK
AGLHALTKNLAIELGDHGVRVNAVAPAVVMSTIYKSFIAEEEIESALQGFNDFHPIGRIGSTEDVADAIEYLLSDKSSWV
TGTVLNVDGGVMAGRN

Sequences:

>Translated_256_residues
MFNTSSIALIVGGSSGMGKATAERLLKAGVPVMILSHDKNNLAEAKQDLESVTKGQVETAQVDLYDSSAVKSFIEQLNAE
KRHIGYLVNAAGFFKPVDFLDHSERDYDLQLDMNRAFFFITQAVAKNMKAHGGGAIVNIGSMWAHQAIKATPSSAYSMQK
AGLHALTKNLAIELGDHGVRVNAVAPAVVMSTIYKSFIAEEEIESALQGFNDFHPIGRIGSTEDVADAIEYLLSDKSSWV
TGTVLNVDGGVMAGRN
>Mature_256_residues
MFNTSSIALIVGGSSGMGKATAERLLKAGVPVMILSHDKNNLAEAKQDLESVTKGQVETAQVDLYDSSAVKSFIEQLNAE
KRHIGYLVNAAGFFKPVDFLDHSERDYDLQLDMNRAFFFITQAVAKNMKAHGGGAIVNIGSMWAHQAIKATPSSAYSMQK
AGLHALTKNLAIELGDHGVRVNAVAPAVVMSTIYKSFIAEEEIESALQGFNDFHPIGRIGSTEDVADAIEYLLSDKSSWV
TGTVLNVDGGVMAGRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=30.078125, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI7705925, Length=257, Percent_Identity=31.5175097276265, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=31.2252964426877, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=30.0813008130081, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI66933014, Length=182, Percent_Identity=31.3186813186813, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=29.0322580645161, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=29.7619047619048, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4503301, Length=229, Percent_Identity=26.2008733624454, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=25.296442687747, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI109715829, Length=234, Percent_Identity=25.6410256410256, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=31.8725099601594, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=32.5490196078431, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=33.1983805668016, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787905, Length=260, Percent_Identity=31.1538461538462, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=27.6422764227642, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI2367175, Length=254, Percent_Identity=29.5275590551181, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788459, Length=256, Percent_Identity=30.859375, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=26.3157894736842, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=28.0155642023346, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1787820, Length=233, Percent_Identity=24.8927038626609, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=26, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=30.9236947791165, Blast_Score=110, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=30.6451612903226, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17555706, Length=255, Percent_Identity=28.2352941176471, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=32.156862745098, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17536651, Length=247, Percent_Identity=25.9109311740891, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17536025, Length=247, Percent_Identity=25.1012145748988, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI115534694, Length=244, Percent_Identity=30.7377049180328, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=29.1828793774319, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=30.241935483871, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=27.34375, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=32.0610687022901, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=28.0769230769231, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=31.8897637795276, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17561272, Length=235, Percent_Identity=25.1063829787234, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=29.7709923664122, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=30, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=254, Percent_Identity=29.1338582677165, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=27.4809160305344, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=30.0751879699248, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=259, Percent_Identity=29.3436293436293, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=256, Percent_Identity=28.515625, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=25.9398496240602, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=27.0992366412214, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=22.8136882129278, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=28.968253968254, Blast_Score=90, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323882, Length=243, Percent_Identity=31.6872427983539, Blast_Score=79, Evalue=9e-16,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=31.7269076305221, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=33.0645161290323, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=30.1587301587302, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=31.0483870967742, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=29.5546558704453, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=30.5220883534137, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24644337, Length=176, Percent_Identity=34.6590909090909, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=26, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI116007236, Length=237, Percent_Identity=24.4725738396624, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27493; Mature: 27493

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNTSSIALIVGGSSGMGKATAERLLKAGVPVMILSHDKNNLAEAKQDLESVTKGQVETA
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEE
QVDLYDSSAVKSFIEQLNAEKRHIGYLVNAAGFFKPVDFLDHSERDYDLQLDMNRAFFFI
EEEECCHHHHHHHHHHHCCCHHHHHEEEECCCCCCCHHHHCCCCCCEEEEEECCHHHHHH
TQAVAKNMKAHGGGAIVNIGSMWAHQAIKATPSSAYSMQKAGLHALTKNLAIELGDHGVR
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCEE
VNAVAPAVVMSTIYKSFIAEEEIESALQGFNDFHPIGRIGSTEDVADAIEYLLSDKSSWV
EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCEE
TGTVLNVDGGVMAGRN
EEEEEECCCCEECCCC
>Mature Secondary Structure
MFNTSSIALIVGGSSGMGKATAERLLKAGVPVMILSHDKNNLAEAKQDLESVTKGQVETA
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEE
QVDLYDSSAVKSFIEQLNAEKRHIGYLVNAAGFFKPVDFLDHSERDYDLQLDMNRAFFFI
EEEECCHHHHHHHHHHHCCCHHHHHEEEECCCCCCCHHHHCCCCCCEEEEEECCHHHHHH
TQAVAKNMKAHGGGAIVNIGSMWAHQAIKATPSSAYSMQKAGLHALTKNLAIELGDHGVR
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCEE
VNAVAPAVVMSTIYKSFIAEEEIESALQGFNDFHPIGRIGSTEDVADAIEYLLSDKSSWV
EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCEE
TGTVLNVDGGVMAGRN
EEEEEECCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]