| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978207
Identifier: 156978207
GI number: 156978207
Start: 2091160
End: 2091279
Strand: Direct
Name: 156978207
Synonym: VIBHAR_07012
Alternate gene names: NA
Gene position: 2091160-2091279 (Clockwise)
Preceding gene: 156978204
Following gene: 156978208
Centisome position: 94.88
GC content: 35.83
Gene sequence:
>120_bases GTGGCTTCCACCTTAAACATTTTCGCAAAAGATAGCATGCCCTCACAAATCTGTCTACCTACCGATAGGTATTGTTTATT TTTCAAAAAAGACTCAACCTACCTATCAGTAGATAATTAA
Upstream 100 bases:
>100_bases TTTGGATATCGCGAAAGCTAAAACCATTAAAACCTCGGCTTTGTATGTAGCTTTCAGCAAGGTCGGCAATCTTTGCAGCC GTTGGGCTAAGTTCTTTCAT
Downstream 100 bases:
>100_bases CATCAAGGGCAAACAATGAAATACGATTTTATTATTATCGGAGGCGGTTTAAGCGGTCTCTACACTGCAGCGTATCTAGA GAAAACAGGGCATAGCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MASTLNIFAKDSMPSQICLPTDRYCLFFKKDSTYLSVDN
Sequences:
>Translated_39_residues MASTLNIFAKDSMPSQICLPTDRYCLFFKKDSTYLSVDN >Mature_38_residues ASTLNIFAKDSMPSQICLPTDRYCLFFKKDSTYLSVDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4465; Mature: 4334
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTLNIFAKDSMPSQICLPTDRYCLFFKKDSTYLSVDN CCCCEEEEECCCCCCEEECCCCCEEEEEECCCEEEEECC >Mature Secondary Structure ASTLNIFAKDSMPSQICLPTDRYCLFFKKDSTYLSVDN CCCEEEEECCCCCCEEECCCCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA