| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978198
Identifier: 156978198
GI number: 156978198
Start: 2082970
End: 2083800
Strand: Reverse
Name: 156978198
Synonym: VIBHAR_07003
Alternate gene names: NA
Gene position: 2083800-2082970 (Counterclockwise)
Preceding gene: 156978199
Following gene: 156978196
Centisome position: 94.55
GC content: 49.46
Gene sequence:
>831_bases ATGCGTCAGATAGAAGCTAAGCTGCTGTTTGCTGATCTGAAACGCGCTGGCTATATTGTTCGCCAAGACGAGAAATGGAT TTTGACCGAAGAGGGTGCCAAGTTTGGCGGTGAGTATGTCGATCACCCTAAATTCGGGCAGTTCATTGTTTGGCCGACTA ACTTGCACATCGAGCTCGCCGCAACGTCTGGTAAAACCTACAGCGCAACCCAGTTGGGTGAGAAGCTTAAGCTCAATGCC AAACGCATGAACCAGCTGTTAAGCGAATTAGGCTGGATCAGCAAATCCGAAGAAGGGTGGAGTTTGACCGAAGCCGGAAT CCGCGCTGGTGGGCAGCAGAGAACCGATAAAGAGTCGCAGAATACCTTTGTGGTGTGGCACGACGTAGTGCTGCGTAACA AGCGGCTCAAGCAGTCTGTGATTGAGTTCTTAGGGCAAGATGCTGAGTCCCATTCGACAGATAAGTCGCTTTCCAGTTTT CGCCAGAAGTTTGAAGCCAAGCACCGCACTTTGGACGGGCATTATGTTCGTTCTAAAGGAGAACTGTTGATCGATAACTG GCTGTATTTGGCAGGAGTAGTACACGCTTATGAGCGTCAGCTGCCGATCGACCAAGACGTGACAAGCGATTTCTACCTAC CAGGTGGCAAGGTCTATTTGCAGTTTTGGGGCAGCGATACTGGCGAGATGTTAGAAGCGGAGCGAGAGAAGATTCGTGCG GTGTACGAGCAGCATAACTTCAACCTCATTGAAGTTGAACTGAGCGAGTTAGATAAGCTCGATGAGGTGTTACCAAAACG TCTGCGCCAGTTTGGTATTCAAGCTTATTAA
Upstream 100 bases:
>100_bases TCAAATCAATGCGTTAATATCCAAGTTCTTACCTTATTTCAAACAGTAGCGGGAGGCATGAATCGTGTCTGAAAAAATAT CGACGTCGGCGCTGGCAAAA
Downstream 100 bases:
>100_bases ACGCTTCGCTAGCGGTTGTTTAAATTCCTAAACCTTTAAACCTGCTAATCTTTAAAAACGAAAAAAACCGTGATGACTCA CGGGTTTTGTGTATTCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRQIEAKLLFADLKRAGYIVRQDEKWILTEEGAKFGGEYVDHPKFGQFIVWPTNLHIELAATSGKTYSATQLGEKLKLNA KRMNQLLSELGWISKSEEGWSLTEAGIRAGGQQRTDKESQNTFVVWHDVVLRNKRLKQSVIEFLGQDAESHSTDKSLSSF RQKFEAKHRTLDGHYVRSKGELLIDNWLYLAGVVHAYERQLPIDQDVTSDFYLPGGKVYLQFWGSDTGEMLEAEREKIRA VYEQHNFNLIEVELSELDKLDEVLPKRLRQFGIQAY
Sequences:
>Translated_276_residues MRQIEAKLLFADLKRAGYIVRQDEKWILTEEGAKFGGEYVDHPKFGQFIVWPTNLHIELAATSGKTYSATQLGEKLKLNA KRMNQLLSELGWISKSEEGWSLTEAGIRAGGQQRTDKESQNTFVVWHDVVLRNKRLKQSVIEFLGQDAESHSTDKSLSSF RQKFEAKHRTLDGHYVRSKGELLIDNWLYLAGVVHAYERQLPIDQDVTSDFYLPGGKVYLQFWGSDTGEMLEAEREKIRA VYEQHNFNLIEVELSELDKLDEVLPKRLRQFGIQAY >Mature_276_residues MRQIEAKLLFADLKRAGYIVRQDEKWILTEEGAKFGGEYVDHPKFGQFIVWPTNLHIELAATSGKTYSATQLGEKLKLNA KRMNQLLSELGWISKSEEGWSLTEAGIRAGGQQRTDKESQNTFVVWHDVVLRNKRLKQSVIEFLGQDAESHSTDKSLSSF RQKFEAKHRTLDGHYVRSKGELLIDNWLYLAGVVHAYERQLPIDQDVTSDFYLPGGKVYLQFWGSDTGEMLEAEREKIRA VYEQHNFNLIEVELSELDKLDEVLPKRLRQFGIQAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31839; Mature: 31839
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIEAKLLFADLKRAGYIVRQDEKWILTEEGAKFGGEYVDHPKFGQFIVWPTNLHIELA CCCHHHHHHHHHHHHCCEEEEECCCEEEECCCHHCCCCCCCCCCCCCEEEEECCEEEEEE ATSGKTYSATQLGEKLKLNAKRMNQLLSELGWISKSEEGWSLTEAGIRAGGQQRTDKESQ ECCCCEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC NTFVVWHDVVLRNKRLKQSVIEFLGQDAESHSTDKSLSSFRQKFEAKHRTLDGHYVRSKG CCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCC ELLIDNWLYLAGVVHAYERQLPIDQDVTSDFYLPGGKVYLQFWGSDTGEMLEAEREKIRA CEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEECCCHHHHHHHHHHHHHH VYEQHNFNLIEVELSELDKLDEVLPKRLRQFGIQAY HHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRQIEAKLLFADLKRAGYIVRQDEKWILTEEGAKFGGEYVDHPKFGQFIVWPTNLHIELA CCCHHHHHHHHHHHHCCEEEEECCCEEEECCCHHCCCCCCCCCCCCCEEEEECCEEEEEE ATSGKTYSATQLGEKLKLNAKRMNQLLSELGWISKSEEGWSLTEAGIRAGGQQRTDKESQ ECCCCEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC NTFVVWHDVVLRNKRLKQSVIEFLGQDAESHSTDKSLSSFRQKFEAKHRTLDGHYVRSKG CCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCC ELLIDNWLYLAGVVHAYERQLPIDQDVTSDFYLPGGKVYLQFWGSDTGEMLEAEREKIRA CEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEECCCHHHHHHHHHHHHHH VYEQHNFNLIEVELSELDKLDEVLPKRLRQFGIQAY HHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA