Click here to switch to the map view.

The map label for this gene is 156978166

Identifier: 156978166

GI number: 156978166

Start: 2062640

End: 2063443

Strand: Direct

Name: 156978166

Synonym: VIBHAR_06971

Alternate gene names: NA

Gene position: 2062640-2063443 (Clockwise)

Preceding gene: 156978165

Following gene: 156978169

Centisome position: 93.59

GC content: 42.29

Gene sequence:

>804_bases
ATGCAGTTAATCGAGCATTTGACTGAGAAAACCTATTCCCACACCCATCAAATTGTCGCCTACGTTAAAGAGACATTTGG
ACTTGATTACACGGTCTCAGGAATGAACAAATGGCTTCACCACAATGGTTTTAGCTACAAGCAACCGAAAGGCGTTCCAC
ACAAATTTGATGAAGCAAAACAGCAAGCTTTCATCGAGGCTTATGAAGCGCTAAAGGCAAGCTGTGGCGAGGATGAATCG
ATAGTCTTTATTGATGCAGTTCACCCAACATTATCAACAAAAATATCTCATGGCTGGATACGAACTGTTCAGGATAAAGT
GATTGAAACAACAGGTAATCGTAGCCGATTGAACATTATTGGTGCACTGAACCTATCGGATATCGGTGCAACCATTGTTC
ACGACTATGAGAACATTAACAGTGAAACGATTGTTCGCTTTTTCTGTAAGTTAAGAGAGAGTTATCCGTTAACCCATAAG
CTTCATATCATCTTAGATGGTGCGGGGTATCACCGCAGTGACTTAGTCAAAGATGCGGCGTTTGTCCTGAATATTGAACT
GCATTATCTTCCACCTTACAGCCCAAACCTCAACCCAATAGAGCGGCTATGGAAAGTAATGAATGAGAAGTCGAGGAACA
ACGTTTACTTCAAAAGAAAACGGGACTTCAAGGAGGCAATAGACCAATTTTTTGCAGTGACTCTTCCAGAGAGCGCAGGC
TCTTTGGCATCTCGAATTAATGATAATTTTCAGATTCTCAGTATGCGCCCCATGAACCCACGGGGCGGTGTTGTTAATGT
TTGA

Upstream 100 bases:

>100_bases
TGAATCGACTGTTGCACGCCATCTCAGCGACTACGTTCTGTCTGAAAAACTGAAGCCTTAAAATGGTGGAAGTCAAAGCA
AGCTTTCTGCCACTCAAACC

Downstream 100 bases:

>100_bases
AGTTCCAAGGTAGGAGCGCATCGATATCAGGCTCAGCTTTCGCGAGCTCTTTCATGCACTTGACCATGTAGTCGTAGAGG
ATAAGGCCGTTGGCTTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives-Like Protein; Transposase Family Protein; Integrase Catalytic Region; Transposase And Inactivated Derivatives; Family Transposase; ISRin1 Transposase OrfB; Transposase Related Protein; Second ORF In Transposon ISC

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MQLIEHLTEKTYSHTHQIVAYVKETFGLDYTVSGMNKWLHHNGFSYKQPKGVPHKFDEAKQQAFIEAYEALKASCGEDES
IVFIDAVHPTLSTKISHGWIRTVQDKVIETTGNRSRLNIIGALNLSDIGATIVHDYENINSETIVRFFCKLRESYPLTHK
LHIILDGAGYHRSDLVKDAAFVLNIELHYLPPYSPNLNPIERLWKVMNEKSRNNVYFKRKRDFKEAIDQFFAVTLPESAG
SLASRINDNFQILSMRPMNPRGGVVNV

Sequences:

>Translated_267_residues
MQLIEHLTEKTYSHTHQIVAYVKETFGLDYTVSGMNKWLHHNGFSYKQPKGVPHKFDEAKQQAFIEAYEALKASCGEDES
IVFIDAVHPTLSTKISHGWIRTVQDKVIETTGNRSRLNIIGALNLSDIGATIVHDYENINSETIVRFFCKLRESYPLTHK
LHIILDGAGYHRSDLVKDAAFVLNIELHYLPPYSPNLNPIERLWKVMNEKSRNNVYFKRKRDFKEAIDQFFAVTLPESAG
SLASRINDNFQILSMRPMNPRGGVVNV
>Mature_267_residues
MQLIEHLTEKTYSHTHQIVAYVKETFGLDYTVSGMNKWLHHNGFSYKQPKGVPHKFDEAKQQAFIEAYEALKASCGEDES
IVFIDAVHPTLSTKISHGWIRTVQDKVIETTGNRSRLNIIGALNLSDIGATIVHDYENINSETIVRFFCKLRESYPLTHK
LHIILDGAGYHRSDLVKDAAFVLNIELHYLPPYSPNLNPIERLWKVMNEKSRNNVYFKRKRDFKEAIDQFFAVTLPESAG
SLASRINDNFQILSMRPMNPRGGVVNV

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30561; Mature: 30561

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIEHLTEKTYSHTHQIVAYVKETFGLDYTVSGMNKWLHHNGFSYKQPKGVPHKFDEAK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHH
QQAFIEAYEALKASCGEDESIVFIDAVHPTLSTKISHGWIRTVQDKVIETTGNRSRLNII
HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEE
GALNLSDIGATIVHDYENINSETIVRFFCKLRESYPLTHKLHIILDGAGYHRSDLVKDAA
EECCHHHHCHHEEHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHEE
FVLNIELHYLPPYSPNLNPIERLWKVMNEKSRNNVYFKRKRDFKEAIDQFFAVTLPESAG
EEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHEEECCCCHH
SLASRINDNFQILSMRPMNPRGGVVNV
HHHHHCCCCEEEEEEECCCCCCCEECC
>Mature Secondary Structure
MQLIEHLTEKTYSHTHQIVAYVKETFGLDYTVSGMNKWLHHNGFSYKQPKGVPHKFDEAK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHH
QQAFIEAYEALKASCGEDESIVFIDAVHPTLSTKISHGWIRTVQDKVIETTGNRSRLNII
HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEE
GALNLSDIGATIVHDYENINSETIVRFFCKLRESYPLTHKLHIILDGAGYHRSDLVKDAA
EECCHHHHCHHEEHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHEE
FVLNIELHYLPPYSPNLNPIERLWKVMNEKSRNNVYFKRKRDFKEAIDQFFAVTLPESAG
EEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHEEECCCCHH
SLASRINDNFQILSMRPMNPRGGVVNV
HHHHHCCCCEEEEEEECCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA