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The map label for this gene is lamB [H]

Identifier: 156978141

GI number: 156978141

Start: 2040991

End: 2042289

Strand: Reverse

Name: lamB [H]

Synonym: VIBHAR_06946

Alternate gene names: 156978141

Gene position: 2042289-2040991 (Counterclockwise)

Preceding gene: 156978142

Following gene: 156978139

Centisome position: 92.66

GC content: 47.96

Gene sequence:

>1299_bases
ATGAAAAGCTTTAAAGTTTTACCTCTCTCTCTTGCGGTGGCCGCTTCGCTTGCTTCTTTACCTTCTTTTGCTGCTGATGC
CGATGTGGAGGCATTAGAAAAACGCATCCAAGAGCTGGAAACAAAACTGGAAACGGGTTACGTGTACGACCAACAACCAG
CAGTGTTATCTGCAGAAACGGAAGTACCGTTGGGTATCGTATTCTCTGGTTACGCTCGTTATGGTGCGGGTTATCAAGGT
AGCGATGCATTAACAGTTGGAACGGCAGGTGCGTTGAACTCAAATGCGACAGGTCGTTTAGGTAACGAACAAAACGGCGG
CGAATTCCAGTTAGCAAAAGCGTTCAAGAGCGACGGTGGTGCGATTTGGGATTTGGTATTCATGTTAGATCATTGGGCAG
ACGCTTCATGGGCTGACGATGGCGGCGTGAACGTGAAGAAGATGTACGCTGGTGCCGCGAACTTGTTTGAATCCCAGCCT
GATTTGTATGTGTGGGCTGGCCGTGACTTCCACCAACGTCCTCAAACAGACCTAAATGACTACTTTTGGATGATGCACGA
TGGTCAAGGTGGTGGTTTCTATAATCTAGATCTAGGCGGTGTGAAGTTTGACTTTAGTGCAGTCGGCCAAGTGGAAGGCT
ATATGGTTGGCGATAACGGCCGCTATGCGCTGACCAGTAAATTACACGGTATCAAGCTTGGCGAATCTGCTGACTTGAGC
ATTTACGCCAACTACGGTTTTGCGTCTGATAAGCTGAAAGACGAAGACGTAGGTGATGTGACCGCTTACCAAGTGGCAGG
TGAACTATCTGCTGCAGGCCAGCGTTTGATTGTACGTTACTCTGACAACGCGAAAGACAGTGTGTTTGATTTAGCAGAAG
ATCAAACCGCACTATTAGTGAGCTTTGATGGCAGCACGTCAATCACTGACAAAGCGGGCATTCAATATTTAGCTGCTTAC
CAATCTTTGGAAGCAGAAGGGGATGAAAGCCGCGTAAACTACAACGCGATTGTGCGCCCGACTTACCAATGGAACGATAT
CCACTCCACGTGGCTAGAAGCAGGCTATAGCGTGGTTGATTACGATGACATCGATGCAACGAATAGCTCTTGGAAAATGA
CGCTATCGCAAAACATGGCTATCGGTCCTGAAACTTGGTCCCGTCCAATGCTGCGTTTCTACGCAACAGTGGGTAATGCA
GATAACGAGTACACAGGTTTTGATTCTGTGACTGGTGAGAAGATTGCAACTGATGTTGACACAGTAACGGTCGGTGCAAT
GTTCGAAGCGTGGTGGTAA

Upstream 100 bases:

>100_bases
TCCTAACCATTGTGGTGTGAAGCCGTAGCGGCTTTTCAATGCTTTCATTCCTTAATATTCCTTTCGGGATAACAACAAAT
ACAAATTTTAGGGATATCAA

Downstream 100 bases:

>100_bases
GCCACACCTAGTTAACTACTGTCCATGTAAAGATGGTAAACACTTAAGGCAGAAGTATCAGGTGTTTACCATCCATTCAT
CTCTTAACCCTTATATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Maltose-inducible porin [H]

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKSFKVLPLSLAVAASLASLPSFAADADVEALEKRIQELETKLETGYVYDQQPAVLSAETEVPLGIVFSGYARYGAGYQG
SDALTVGTAGALNSNATGRLGNEQNGGEFQLAKAFKSDGGAIWDLVFMLDHWADASWADDGGVNVKKMYAGAANLFESQP
DLYVWAGRDFHQRPQTDLNDYFWMMHDGQGGGFYNLDLGGVKFDFSAVGQVEGYMVGDNGRYALTSKLHGIKLGESADLS
IYANYGFASDKLKDEDVGDVTAYQVAGELSAAGQRLIVRYSDNAKDSVFDLAEDQTALLVSFDGSTSITDKAGIQYLAAY
QSLEAEGDESRVNYNAIVRPTYQWNDIHSTWLEAGYSVVDYDDIDATNSSWKMTLSQNMAIGPETWSRPMLRFYATVGNA
DNEYTGFDSVTGEKIATDVDTVTVGAMFEAWW

Sequences:

>Translated_432_residues
MKSFKVLPLSLAVAASLASLPSFAADADVEALEKRIQELETKLETGYVYDQQPAVLSAETEVPLGIVFSGYARYGAGYQG
SDALTVGTAGALNSNATGRLGNEQNGGEFQLAKAFKSDGGAIWDLVFMLDHWADASWADDGGVNVKKMYAGAANLFESQP
DLYVWAGRDFHQRPQTDLNDYFWMMHDGQGGGFYNLDLGGVKFDFSAVGQVEGYMVGDNGRYALTSKLHGIKLGESADLS
IYANYGFASDKLKDEDVGDVTAYQVAGELSAAGQRLIVRYSDNAKDSVFDLAEDQTALLVSFDGSTSITDKAGIQYLAAY
QSLEAEGDESRVNYNAIVRPTYQWNDIHSTWLEAGYSVVDYDDIDATNSSWKMTLSQNMAIGPETWSRPMLRFYATVGNA
DNEYTGFDSVTGEKIATDVDTVTVGAMFEAWW
>Mature_432_residues
MKSFKVLPLSLAVAASLASLPSFAADADVEALEKRIQELETKLETGYVYDQQPAVLSAETEVPLGIVFSGYARYGAGYQG
SDALTVGTAGALNSNATGRLGNEQNGGEFQLAKAFKSDGGAIWDLVFMLDHWADASWADDGGVNVKKMYAGAANLFESQP
DLYVWAGRDFHQRPQTDLNDYFWMMHDGQGGGFYNLDLGGVKFDFSAVGQVEGYMVGDNGRYALTSKLHGIKLGESADLS
IYANYGFASDKLKDEDVGDVTAYQVAGELSAAGQRLIVRYSDNAKDSVFDLAEDQTALLVSFDGSTSITDKAGIQYLAAY
QSLEAEGDESRVNYNAIVRPTYQWNDIHSTWLEAGYSVVDYDDIDATNSSWKMTLSQNMAIGPETWSRPMLRFYATVGNA
DNEYTGFDSVTGEKIATDVDTVTVGAMFEAWW

Specific function: Involved in the transport of maltose and maltodextrins [H]

COG id: COG4580

COG function: function code G; Maltoporin (phage lambda and maltose receptor)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

Organism=Escherichia coli, GI1790469, Length=439, Percent_Identity=24.8291571753986, Blast_Score=95, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- ProDom:   PD008788 [H]

Pfam domain/function: PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 47020; Mature: 47020

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFKVLPLSLAVAASLASLPSFAADADVEALEKRIQELETKLETGYVYDQQPAVLSAET
CCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEECCC
EVPLGIVFSGYARYGAGYQGSDALTVGTAGALNSNATGRLGNEQNGGEFQLAKAFKSDGG
CCCEEEEEECHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCC
AIWDLVFMLDHWADASWADDGGVNVKKMYAGAANLFESQPDLYVWAGRDFHQRPQTDLND
HHHHHHHHHHHCCCCCCCCCCCCEEEEEHHCHHHHHCCCCCEEEECCCCCCCCCCCCCCC
YFWMMHDGQGGGFYNLDLGGVKFDFSAVGQVEGYMVGDNGRYALTSKLHGIKLGESADLS
EEEEEEECCCCCEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEECCCCEECCCCCCEE
IYANYGFASDKLKDEDVGDVTAYQVAGELSAAGQRLIVRYSDNAKDSVFDLAEDQTALLV
EEEECCCCCCCCCCCCCCCEEEEHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCEEEEE
SFDGSTSITDKAGIQYLAAYQSLEAEGDESRVNYNAIVRPTYQWNDIHSTWLEAGYSVVD
EECCCCCCCHHHHHHHHHHHHHHCCCCCCCEECEEEEEECCCCCCHHHHHHHHCCCEEEE
YDDIDATNSSWKMTLSQNMAIGPETWSRPMLRFYATVGNADNEYTGFDSVTGEKIATDVD
CCCCCCCCCCEEEEEECCCEECCCHHCCHHEEEEEECCCCCCCCCCCCCCCCCHHCCCCC
TVTVGAMFEAWW
EEEECCEEEECC
>Mature Secondary Structure
MKSFKVLPLSLAVAASLASLPSFAADADVEALEKRIQELETKLETGYVYDQQPAVLSAET
CCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEECCC
EVPLGIVFSGYARYGAGYQGSDALTVGTAGALNSNATGRLGNEQNGGEFQLAKAFKSDGG
CCCEEEEEECHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCC
AIWDLVFMLDHWADASWADDGGVNVKKMYAGAANLFESQPDLYVWAGRDFHQRPQTDLND
HHHHHHHHHHHCCCCCCCCCCCCEEEEEHHCHHHHHCCCCCEEEECCCCCCCCCCCCCCC
YFWMMHDGQGGGFYNLDLGGVKFDFSAVGQVEGYMVGDNGRYALTSKLHGIKLGESADLS
EEEEEEECCCCCEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEECCCCEECCCCCCEE
IYANYGFASDKLKDEDVGDVTAYQVAGELSAAGQRLIVRYSDNAKDSVFDLAEDQTALLV
EEEECCCCCCCCCCCCCCCEEEEHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCEEEEE
SFDGSTSITDKAGIQYLAAYQSLEAEGDESRVNYNAIVRPTYQWNDIHSTWLEAGYSVVD
EECCCCCCCHHHHHHHHHHHHHHCCCCCCCEECEEEEEECCCCCCHHHHHHHHCCCEEEE
YDDIDATNSSWKMTLSQNMAIGPETWSRPMLRFYATVGNADNEYTGFDSVTGEKIATDVD
CCCCCCCCCCEEEEEECCCEECCCHHCCHHEEEEEECCCCCCCCCCCCCCCCCHHCCCCC
TVTVGAMFEAWW
EEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]