| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978125
Identifier: 156978125
GI number: 156978125
Start: 2024340
End: 2024852
Strand: Direct
Name: 156978125
Synonym: VIBHAR_06930
Alternate gene names: NA
Gene position: 2024340-2024852 (Clockwise)
Preceding gene: 156978124
Following gene: 156978126
Centisome position: 91.85
GC content: 42.11
Gene sequence:
>513_bases ATGACGCGATCTTGCCGAAACAAGGGCAATAACTTCAAAGGGCACAAGATGAGAAAAACAGTAGTACTCGCTTTACTTTT GTTTGCACCCATACTTTTTGCAAACACGATACAGTTTAGCAGTTTAGAAAAATCCAATATCGTTGTGGCACTGTCAGACC TTGAGTCGATGCCTCAAACCACTTATACCACCGCTCTGCCTTGGCTTGAAAAGCCCGCCGAGTTTAATGGCGTAAAACTC AGTACACTTTTACAGCACACACTCGGTGAAGTTCCTCAGCACGTCCAAGTAAGGGCAATGAATGATTACTATTCCTATAT TTCACGTGAAGACATCCTTCGTTACCAACCTATCATTGCGTATAAACAAGACCATAATTACATCAAGGTTCGCAATAAGG GACCATATTGGCTGATCTACCCAGTCACAAAATACCCAGAGCTTGATGTCAGTTACTACCACTCCCAAATGGTTTGGCAA ATCAATAGGATCAGTACGAAAGAAGAAGAATGA
Upstream 100 bases:
>100_bases CCACCAACGGTTACTTTTCACCCATAACGTATTATATAAATTCATCAAGTTGGCTCTATTATTAATAACTATATAACCGA GATTTCAGCAGATCGATTCT
Downstream 100 bases:
>100_bases AAGTACAACCCAACGTTCCCAAGCAGGGACCTTTTTCATCCCGAAGCAAAACCTTACTTCTGATTTTTGCTTCCACACTG CTGGTCGCCAATATCGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTRSCRNKGNNFKGHKMRKTVVLALLLFAPILFANTIQFSSLEKSNIVVALSDLESMPQTTYTTALPWLEKPAEFNGVKL STLLQHTLGEVPQHVQVRAMNDYYSYISREDILRYQPIIAYKQDHNYIKVRNKGPYWLIYPVTKYPELDVSYYHSQMVWQ INRISTKEEE
Sequences:
>Translated_170_residues MTRSCRNKGNNFKGHKMRKTVVLALLLFAPILFANTIQFSSLEKSNIVVALSDLESMPQTTYTTALPWLEKPAEFNGVKL STLLQHTLGEVPQHVQVRAMNDYYSYISREDILRYQPIIAYKQDHNYIKVRNKGPYWLIYPVTKYPELDVSYYHSQMVWQ INRISTKEEE >Mature_169_residues TRSCRNKGNNFKGHKMRKTVVLALLLFAPILFANTIQFSSLEKSNIVVALSDLESMPQTTYTTALPWLEKPAEFNGVKLS TLLQHTLGEVPQHVQVRAMNDYYSYISREDILRYQPIIAYKQDHNYIKVRNKGPYWLIYPVTKYPELDVSYYHSQMVWQI NRISTKEEE
Specific function: Unknown
COG id: COG3915
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19907; Mature: 19776
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSCRNKGNNFKGHKMRKTVVLALLLFAPILFANTIQFSSLEKSNIVVALSDLESMPQT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHCCCC TYTTALPWLEKPAEFNGVKLSTLLQHTLGEVPQHVQVRAMNDYYSYISREDILRYQPIIA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCHHHHHHHCCEEE YKQDHNYIKVRNKGPYWLIYPVTKYPELDVSYYHSQMVWQINRISTKEEE EECCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHEEEEECCCCCCCC >Mature Secondary Structure TRSCRNKGNNFKGHKMRKTVVLALLLFAPILFANTIQFSSLEKSNIVVALSDLESMPQT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHCCCC TYTTALPWLEKPAEFNGVKLSTLLQHTLGEVPQHVQVRAMNDYYSYISREDILRYQPIIA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCHHHHHHHCCEEE YKQDHNYIKVRNKGPYWLIYPVTKYPELDVSYYHSQMVWQINRISTKEEE EECCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA